Burkholderia plantarii PG1: BGL_1c00380
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Entry
BGL_1c00380 CDS
T03632
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
bgp
Burkholderia plantarii PG1
Brite
KEGG Orthology (KO) [BR:
bgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgp03032
]
BGL_1c00380 (hupA)
03036 Chromosome and associated proteins [BR:
bgp03036
]
BGL_1c00380 (hupA)
03400 DNA repair and recombination proteins [BR:
bgp03400
]
BGL_1c00380 (hupA)
DNA replication proteins [BR:
bgp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BGL_1c00380 (hupA)
Chromosome and associated proteins [BR:
bgp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BGL_1c00380 (hupA)
DNA repair and recombination proteins [BR:
bgp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BGL_1c00380 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF937
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AJK44592
UniProt:
A0A0B6RGV3
LinkDB
All DBs
Position
1:complement(41990..42268)
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AA seq
92 aa
AA seq
DB search
MNKQELIDAVAAQTGASKAQTGETLDTLLEVIKKAVSKGDAVQLIGFGSFGSGKRAARTG
RNPKTGETIKIPAAKTVKFTAGKAFKDAVNKR
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaggaactgatcgacgccgtcgccgcacagacgggcgccagcaaggctcaa
accggcgaaacgctggacacgctcctcgaggtgatcaagaaggccgtgtcgaaaggcgac
gcggttcagttgatcggcttcggcagcttcggttcgggtaagcgtgcagcacgtaccggc
cgcaacccgaagacgggcgaaaccatcaagattccggctgccaagaccgtcaagttcacg
gctggcaaggcattcaaggatgcagtgaacaagcgctga
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