Burkholderia plantarii PG1: BGL_1c04980
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Entry
BGL_1c04980 CDS
T03632
Name
(GenBank) ribonuclease II (RNB)-like protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bgp
Burkholderia plantarii PG1
Brite
KEGG Orthology (KO) [BR:
bgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgp03016
]
BGL_1c04980
Enzymes [BR:
bgp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BGL_1c04980
Transfer RNA biogenesis [BR:
bgp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BGL_1c04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AJK45034
UniProt:
A0A0B6RS78
LinkDB
All DBs
Position
1:558127..560274
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AA seq
715 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAAGELMQQADAA
AQQIDLDFLWECAPQEEFAYGALADEYFGSGYGPVERAALVLRMHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAGYEEELKARRLPAAFEGKALALLTRPDKNSIEYKA
LDAAALALGVSPARLMLDCGGVASARALHEARFLAEHFPHGTGFPPVTVGALPEDLPRAN
VDAFSIDDVTTTEIDDAFSVEHLPENRVRIGVHIAAPALGITRGDEIDAVARARLSTVYM
PGDKITMLPDDVVEVFTLKEGGFRPALSLYIIVDRETQDIVANETRAEYVFVKSNLRHNT
LEEVVTEDTLAAGSGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGEHISITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRALGVPTGPKRTR
MQTSAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYA
VVQGFDDTYTAYADHQRRMEYFWCLRWLRQENRRQVVAAVVKGDLVRLEDVPLLLHVPGL
GVHARGTRVLLDVMSIDELTIEASVRLLNVLDAPSVSGAETADEDAEGDGDDTLVDAPDD
SAESEAEALAEADAGDAAEGESADAGAGADADAASDVPEASGSSEAAGSGEDDTK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtttttttcgaggaatcgggcagtttcaaggcgggtagcgtgctgtcgcgccag
ggcgacgcgttccaggtcgagttgccgggcgggcggcgcgccaaggtgcgcgccaaggac
gtgctgatcgagttcgacaagccggctgccggcgaactgatgcagcaggccgacgcggcc
gcgcagcagatcgatctcgattttctgtgggaatgcgcgccgcaggaggagttcgcctac
ggcgcgctcgccgacgagtatttcggcagcggctacgggccggtcgagcgcgcggcgctg
gtgctgcgcatgcacggctcgcccgtctatttccgccgcaaggggcgcggccagtaccag
cgcgcgcccgaggaacagctcaagatggcgctcgcctcgctcgagcgcaagcgccagcag
gcgctggtgcaggccggctacgaagaggaactgaaggcgcgccggctgccggccgcgttc
gagggcaaggcgctcgcgctgctgacccgtccggacaagaactcgatcgaatacaaggcg
ctcgacgcggccgcgctcgcgctcggcgtgtcgccggcacggctgatgctcgactgcggc
ggcgtggcctcggcgcgcgcgctgcacgaggcgcgcttcctcgccgagcacttcccgcac
ggcacgggctttccgcccgtgacggtcggcgcgctgccggaggatctgccgcgcgccaac
gtcgacgcgttctcgattgacgacgtgaccaccaccgagatcgacgacgcgttctcggtc
gagcacctgcccgagaaccgcgtgcggatcggcgtccacatcgcggcgccggcgctcggc
atcacgcgcggcgacgagatcgacgcggtcgcgcgcgcgcggctgtcgacggtctacatg
cccggcgacaagatcaccatgctgcccgacgacgtggtcgaggtattcacgctgaaggag
ggcggcttccgcccggcgttgtcgctctatatcatcgtcgatcgcgagacgcaggacatc
gtcgcgaacgagacgcgcgccgagtacgtgttcgtgaagagcaacctgcgccacaacacg
ctcgaggaagtggtcaccgaggacacgctcgcggccggcagtggcgactatccccacaag
gacgacattgcggtgctgtggccgctcgcgcaggcgctgttcgagaagcgccaggtggcg
cgcgccggctacggcctgaagcgcgaggtgcagcgcaacaccgactacaacttctacgtc
gagggcgagcacatctcgatcacgccgcgccggcgcggttcgccgctcgacctgatcgtc
tcggagctggcgatcctcgcgaactcgacctggggcgcgttcctgcacgaccacacggtg
ccgggcatctaccgctcgcagcgcgcgctcggcgtgccgaccggcccgaagcgcacgcgc
atgcagaccagcgccgcgccgcacgagggcctcggcgtcgcgcagtacgcctggagcacc
tcgccgctgcgccgctacgtcgacctcgtcaaccagtggcagctgctcgcctgcgtacag
cacggcgtgacggccaagctggccgcgccgttcaagccgaaggacgccgatctctacgcg
gtagtgcagggcttcgacgacacctacacggcctacgccgaccaccagcgccgcatggag
tatttctggtgcctgcgctggctgcgtcaggagaaccgccggcaggtggtcgccgcggtc
gtgaagggcgacctggtgcggctcgaggacgtgccgctgctgctgcacgtgccggggctc
ggcgtccacgcgcgcggcacgcgcgtgctgctcgacgtcatgtcgatcgacgaactgacg
atcgaggcctcggtgcgcctgctgaacgtgctcgacgcaccgagcgtgtcgggtgccgag
acggccgacgaggacgccgagggcgacggcgacgacacgctggtggacgcgcccgacgat
tcggccgagagcgaggcggaggcgctggccgaggcggacgcgggcgacgcggccgaaggc
gagtccgccgacgcgggcgccggtgccgatgccgacgccgcctccgacgtgccggaggct
tccggttcgtccgaggcagcgggcagcggcgaggacgacacgaaatga
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