Entry |
|
Symbol |
uvrD
|
Name |
(GenBank) DNA helicase II
|
KO |
|
Organism |
bgp Burkholderia plantarii PG1
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:bgp00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BGL_1c15410 (uvrD)
03430 Mismatch repair
BGL_1c15410 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:bgp03400]
BGL_1c15410 (uvrD)
Enzymes [BR:bgp01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BGL_1c15410 (uvrD)
DNA repair and recombination proteins [BR:bgp03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BGL_1c15410 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BGL_1c15410 (uvrD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:1800481..1802856
|
AA seq |
791 aa
MPDLLANLNPEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGYASPPTVLAVTF
TNKAAREMLSRLSAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTADQLSA
IKRLMKAANIDDEKYPPKNVQYFINNAKEQGLRPDKVEANDSFNRMFVELYQAYDQQCQR
EGVVDFPELLLRCFELLSFNPALRAHYQARFRHILVDEFQDTNKLQYAWLKLLAGEQNAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANHLIAHNSRR
LGKNLRTEAGHGEPVRVYEAATDSQEAGWIIEEIRSLISGGMARSEVAVLYRSNAQSRAI
EHTLMTAGIAYRVYGGLRFFERQEIKHALAYLRLIDNPSDDTAFARVVNFPTRGIGARSI
EQLADAARLHDCAMAAAIPYVTGKAGTSLGAFANLIAKLRAETAQMSLPETVEYVVRASG
LADFYQGEREGQDRLENLQELVNAAAAFVSEEGYGLDTPARSIPLRPGASAAPELAAGDE
ADAVLAPAGLDDPSQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFT
AVFITGLEEGLFPHENSALETDGLEEERRLMYVAITRAKERLYLSFAQSRLLHGQTRYNI
RSRFFDELPQQVLKWLTPQVEAGSRWGGRADNAGWGRNWFARPGGGNGGGGGSRDAVVDA
AVTAPLPAFANAQRAAGNGFKVGQPVFHTKFGEGTVTALEGEGADAKAQVRFKRHGEKWL
ALAVAKLQAVE |
NT seq |
2376 nt +upstreamnt +downstreamnt
atgcccgatctgttagcgaacctgaaccccgaacaatacgccgccgtcacgctgccgaac
gagccggcgctgattctcgccggtgcgggcagcggcaagacgcgcgtgctgatcacgcgg
atcgcgtggctgatccagcacggctacgcgtcgccgcccaccgtgctggccgtcaccttc
accaacaaggccgcgcgcgagatgctctcgcgcctgtcggcgatgatgccgatcgacacg
cgcggcatgtggatcggcaccttccacggcctctgcaaccgcatgctgcgcgcgcactat
cgcgacgccgggctgccgcagacgttccagatcctcgacacggccgaccagctctccgcc
atcaagcggctgatgaaggccgcgaacatcgacgacgagaaatatccgccgaagaacgtc
cagtacttcatcaacaacgccaaggagcaagggctgcgcccggacaaggtcgaggccaac
gacagcttcaaccggatgttcgtcgagctctaccaggcctacgaccagcagtgccagcgc
gagggcgtggtcgatttccccgagctgctgctgcgctgcttcgagttgctgagcttcaac
ccggcgctgcgcgcgcactatcaggcgcgcttccggcacatcctggtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagctgctggccggcgagcagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaggacgagttccgggtccgcaacctgatcaagctcgagcagaactac
cgctcgcacggcaacatcctcgacgcggcgaaccacctgatcgcccacaactcgcgccgg
ctcggcaagaacctgcgcaccgaggcgggccacggcgagccggtgcgcgtctacgaggcg
gccaccgattcgcaggaggccggctggatcatcgaggagatccgctcgctgatcagcggc
ggcatggcgcgcagcgaagtggcggtgctctatcgcagcaacgcgcagtcgcgcgcgatc
gagcacacgctgatgacggccggcatcgcctaccgcgtctacggcggcctgcgcttcttc
gagcgccaggaaatcaagcacgcgctcgcctacctgcgcctgatcgacaacccgagcgac
gacacggcgttcgcgcgcgtggtgaacttcccgacgcgcgggatcggcgcgcgctcgatc
gagcaactggccgacgcggcgcgcctgcacgactgcgcgatggcggccgcgattccctac
gtgaccggcaaggccggcacgagcctcggcgcgttcgcgaacctgatcgcgaagctgcgc
gccgaaaccgcgcagatgagcctgccggagacggtcgagtacgtggtgcgcgcgagcggc
ctggccgatttctaccagggcgagcgcgaagggcaggaccgcctcgagaacctgcaggaa
ctcgtcaacgcggccgccgcgttcgtcagcgaggaaggctacgggctcgacacgccggcg
cgctcgatcccgctgcgcccgggcgcgagcgccgcgcccgaactggcggcgggcgacgag
gccgacgcggtgctggcgccggccggcctcgacgatccgtcccagaaccccgacaccatg
acgccgctcgcgggctttctctcgcacgcctcgctggaggccggcgacaaccaggcccag
gccggccaggacgccgtgcagctgatgacggtgcatgcggccaaggggctcgaattcacg
gcggtgttcatcaccgggctcgaggaaggcctgttcccgcacgagaacagcgcgctcgaa
accgacggactcgaggaggagcgccggctgatgtacgtggcgatcacgcgcgccaaggag
cggctctacctgtcgttcgcgcagagccggctgctgcatggccagacccgctacaacatc
cgctcgcgcttcttcgacgagctgccgcagcaggtgctgaagtggctgacgccgcaggtc
gaggccggcagccgctggggcggccgcgccgacaacgccggctggggccgcaactggttc
gcgcggccgggcggcggcaacggcggtggcggcggctcgcgcgacgcggtggtggacgcc
gccgtgacggcgccgctgcccgcgttcgcgaacgcgcagcgcgcggccggcaacggcttc
aaggtcggccagccggtgttccatacgaaattcggcgagggcaccgtgacggccctcgaa
ggtgaaggcgcggacgcgaaggcgcaggtccgcttcaagcgccacggcgagaaatggctc
gcgctcgcggtggcgaaactccaggcagtggaatga |