Burkholderia plantarii PG1: BGL_1c15410
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Entry
BGL_1c15410 CDS
T03632
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgp
Burkholderia plantarii PG1
Pathway
bgp03420
Nucleotide excision repair
bgp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BGL_1c15410 (uvrD)
03430 Mismatch repair
BGL_1c15410 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgp03400
]
BGL_1c15410 (uvrD)
Enzymes [BR:
bgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BGL_1c15410 (uvrD)
DNA repair and recombination proteins [BR:
bgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BGL_1c15410 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BGL_1c15410 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AJK46057
UniProt:
A0A0B6RL56
LinkDB
All DBs
Position
1:1800481..1802856
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AA seq
791 aa
AA seq
DB search
MPDLLANLNPEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGYASPPTVLAVTF
TNKAAREMLSRLSAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTADQLSA
IKRLMKAANIDDEKYPPKNVQYFINNAKEQGLRPDKVEANDSFNRMFVELYQAYDQQCQR
EGVVDFPELLLRCFELLSFNPALRAHYQARFRHILVDEFQDTNKLQYAWLKLLAGEQNAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANHLIAHNSRR
LGKNLRTEAGHGEPVRVYEAATDSQEAGWIIEEIRSLISGGMARSEVAVLYRSNAQSRAI
EHTLMTAGIAYRVYGGLRFFERQEIKHALAYLRLIDNPSDDTAFARVVNFPTRGIGARSI
EQLADAARLHDCAMAAAIPYVTGKAGTSLGAFANLIAKLRAETAQMSLPETVEYVVRASG
LADFYQGEREGQDRLENLQELVNAAAAFVSEEGYGLDTPARSIPLRPGASAAPELAAGDE
ADAVLAPAGLDDPSQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFT
AVFITGLEEGLFPHENSALETDGLEEERRLMYVAITRAKERLYLSFAQSRLLHGQTRYNI
RSRFFDELPQQVLKWLTPQVEAGSRWGGRADNAGWGRNWFARPGGGNGGGGGSRDAVVDA
AVTAPLPAFANAQRAAGNGFKVGQPVFHTKFGEGTVTALEGEGADAKAQVRFKRHGEKWL
ALAVAKLQAVE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgttagcgaacctgaaccccgaacaatacgccgccgtcacgctgccgaac
gagccggcgctgattctcgccggtgcgggcagcggcaagacgcgcgtgctgatcacgcgg
atcgcgtggctgatccagcacggctacgcgtcgccgcccaccgtgctggccgtcaccttc
accaacaaggccgcgcgcgagatgctctcgcgcctgtcggcgatgatgccgatcgacacg
cgcggcatgtggatcggcaccttccacggcctctgcaaccgcatgctgcgcgcgcactat
cgcgacgccgggctgccgcagacgttccagatcctcgacacggccgaccagctctccgcc
atcaagcggctgatgaaggccgcgaacatcgacgacgagaaatatccgccgaagaacgtc
cagtacttcatcaacaacgccaaggagcaagggctgcgcccggacaaggtcgaggccaac
gacagcttcaaccggatgttcgtcgagctctaccaggcctacgaccagcagtgccagcgc
gagggcgtggtcgatttccccgagctgctgctgcgctgcttcgagttgctgagcttcaac
ccggcgctgcgcgcgcactatcaggcgcgcttccggcacatcctggtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagctgctggccggcgagcagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaggacgagttccgggtccgcaacctgatcaagctcgagcagaactac
cgctcgcacggcaacatcctcgacgcggcgaaccacctgatcgcccacaactcgcgccgg
ctcggcaagaacctgcgcaccgaggcgggccacggcgagccggtgcgcgtctacgaggcg
gccaccgattcgcaggaggccggctggatcatcgaggagatccgctcgctgatcagcggc
ggcatggcgcgcagcgaagtggcggtgctctatcgcagcaacgcgcagtcgcgcgcgatc
gagcacacgctgatgacggccggcatcgcctaccgcgtctacggcggcctgcgcttcttc
gagcgccaggaaatcaagcacgcgctcgcctacctgcgcctgatcgacaacccgagcgac
gacacggcgttcgcgcgcgtggtgaacttcccgacgcgcgggatcggcgcgcgctcgatc
gagcaactggccgacgcggcgcgcctgcacgactgcgcgatggcggccgcgattccctac
gtgaccggcaaggccggcacgagcctcggcgcgttcgcgaacctgatcgcgaagctgcgc
gccgaaaccgcgcagatgagcctgccggagacggtcgagtacgtggtgcgcgcgagcggc
ctggccgatttctaccagggcgagcgcgaagggcaggaccgcctcgagaacctgcaggaa
ctcgtcaacgcggccgccgcgttcgtcagcgaggaaggctacgggctcgacacgccggcg
cgctcgatcccgctgcgcccgggcgcgagcgccgcgcccgaactggcggcgggcgacgag
gccgacgcggtgctggcgccggccggcctcgacgatccgtcccagaaccccgacaccatg
acgccgctcgcgggctttctctcgcacgcctcgctggaggccggcgacaaccaggcccag
gccggccaggacgccgtgcagctgatgacggtgcatgcggccaaggggctcgaattcacg
gcggtgttcatcaccgggctcgaggaaggcctgttcccgcacgagaacagcgcgctcgaa
accgacggactcgaggaggagcgccggctgatgtacgtggcgatcacgcgcgccaaggag
cggctctacctgtcgttcgcgcagagccggctgctgcatggccagacccgctacaacatc
cgctcgcgcttcttcgacgagctgccgcagcaggtgctgaagtggctgacgccgcaggtc
gaggccggcagccgctggggcggccgcgccgacaacgccggctggggccgcaactggttc
gcgcggccgggcggcggcaacggcggtggcggcggctcgcgcgacgcggtggtggacgcc
gccgtgacggcgccgctgcccgcgttcgcgaacgcgcagcgcgcggccggcaacggcttc
aaggtcggccagccggtgttccatacgaaattcggcgagggcaccgtgacggccctcgaa
ggtgaaggcgcggacgcgaaggcgcaggtccgcttcaagcgccacggcgagaaatggctc
gcgctcgcggtggcgaaactccaggcagtggaatga
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