Burkholderia plantarii PG1: BGL_1c16120
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Entry
BGL_1c16120 CDS
T03632
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bgp
Burkholderia plantarii PG1
Brite
KEGG Orthology (KO) [BR:
bgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgp03016
]
BGL_1c16120 (truB)
Enzymes [BR:
bgp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BGL_1c16120 (truB)
Transfer RNA biogenesis [BR:
bgp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BGL_1c16120 (truB)
Prokaryotic type
BGL_1c16120 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AJK46126
UniProt:
A0A0B6S1L3
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All DBs
Position
1:1880518..1881474
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AA seq
318 aa
AA seq
DB search
MTTAPQRSQQPRVPRRMLDGVLLLDKPVGLSSNDALIRAKRLYLAKKAGHTGTLDPLASG
LLPLCFGEATKFSQDLLEADKTYEATMRLGIRTTTGDAEGEAVETREVQVRRTAVEAVLP
RFLGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTIHALELLACELPDVTFRVT
CSKGTYVRTLAEDIGEALGCGAHLVALRRTGVGALTLEHAVTLDALSDAEAAERDGWLQP
VDALLSTFPPVRLDADEAKRFRHGQRLRLAAAPETGADDEAGARVRVYDEAGQLLGVARL
LDGVLAPERLVVSGEAAG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgctcctcaacgctcccagcaaccacgcgtgccgcgccgcatgctcgacggc
gtgctgctgctcgacaagcccgtcgggctgtcgagcaacgacgcgctgatccgcgccaag
cgcctctatctcgcgaagaaggccggccacaccggcacgctcgatccgctcgcctccggc
ctgctgccgctctgcttcggcgaggccaccaagttctcgcaggatctgctcgaagccgac
aagacctatgaagcgacgatgcggctcggcatccgcacgaccaccggcgacgccgagggc
gaggcggtcgagacgcgcgaggtgcaggtccggcgcaccgccgtcgaggccgtgctgccg
cgctttctcggcgagatcgtgcaggtgccgccgatgtattcggcgctcaagcgcgacggc
aaaccgctctacgaatacgcgcgcgccgggcagaccgtcgagcgcgagggccgcaacgtg
acgatccacgcgctcgaactgctcgcgtgcgaactgcccgacgtgacgttccgcgtgacc
tgcagcaagggcacctacgtgcgcacgctcgccgaggatatcggcgaggcgctcggctgc
ggcgcgcatctggtggcgctgcggcgcaccggcgtcggcgcgctgaccctcgagcacgcg
gtcacgctcgacgcgctgtcggatgccgaagccgccgaacgcgacggctggctgcagccc
gtcgatgcgctgctgtcgacgtttccgccggtgcggctcgacgccgacgaagcgaagcgg
ttccggcacggccagcggctgcggctcgccgcggcgcccgagaccggcgccgatgacgaa
gcgggcgcgcgggtgcgcgtgtacgacgaggccgggcaactgctcggcgtggcgcgcctg
ctcgatggcgtgctggcaccggagcggctcgtcgtcagcggcgaggcggccggctga
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