Burkholderia plantarii PG1: BGL_1c28440
Help
Entry
BGL_1c28440 CDS
T03632
Name
(GenBank) putative ATP-dependent RNA helicase 2
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgp
Burkholderia plantarii PG1
Pathway
bgp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGL_1c28440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgp03019
]
BGL_1c28440
Enzymes [BR:
bgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BGL_1c28440
Messenger RNA biogenesis [BR:
bgp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BGL_1c28440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AJK47322
UniProt:
A0A0B6RPS7
LinkDB
All DBs
Position
1:complement(3273265..3274737)
Genome browser
AA seq
490 aa
AA seq
DB search
MSDAAVTSVDATFDQFGLAPDILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTG
KTASFSLPIIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVHAYAKHTALRSAV
VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQMLVLDEADRMLDMGFLP
DLQRILNLLPKVRQTLLFSATFSPEIKKLASTYLTNPQTIEVARSNATATNVTQIVYDIP
EGDKQAAVVKLIRDRALKQVIVFCNSKLGASRLARQLERDGVIATAIHGDRSQNERMQAL
DAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSL
CSPNERKQLADIEKLIKRDLPLQPLAIDAPVRARREHGERSERGERSERGERGSRDESRA
PRRAHGGERSHHHHSRREAPIDEFFLKPYEPAPSARQPEEATKPAQPEKKSKQPLAALLG
GFGMPRRSSS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgcagcagtcacgtccgtcgatgcaactttcgatcagttcggcctcgcgccc
gacattctgaaggccattgcggaacagggctatacgacgcccacgccgatccaggcgaaa
gcgattccagtcgtgctgtccgggcgcgacgtgatgggcgccgcgcagacgggcaccggc
aagaccgccagcttctcgctgccgatcatccagcggctgctgccgcaggccagcaccagc
gcctcgcccgcgcgccacccggtgcgcgcgctgatcctcacgccgacgcgcgaactggcc
gaccaggtggccgccaacgtccatgcctacgcgaagcacacggcgctgcgcagcgccgtg
gtgttcggcggcgtcgacatgaacccgcagatggccgagctgcggcgcggcgtcgagatc
ctgatcgccacgccgggccggctgctcgaccacgtgcagcagaagacggccaaccttgga
caggtgcagatgctggtgctcgacgaggccgaccggatgctcgacatgggcttcctgccc
gacctgcagcggatcctgaacctgctgccgaaggtgcgccagacgctgctgttctcggcg
acgttctcgcccgaaatcaagaagctggcctcgacctacctgaccaatccgcagaccatc
gaagtcgcgcgcagcaatgcgaccgcgaccaacgtcacgcagatcgtctacgacatcccc
gagggcgacaagcaggcggccgtggtcaagctgatccgcgatcgcgcgctcaagcaggtg
atcgtgttctgcaacagcaagctcggtgcgagccggctcgcgcgccagctcgaacgcgac
ggcgtgatcgccacggcgatccacggcgaccgctcgcagaacgagcgaatgcaggcgctc
gacgcgttcaagcgcggcgaggtcgaggcgctggtggccaccgacgtggccgcgcgcggg
ctcgacatcgccgaactgccggccgtgatcaatttcgatctgccgttcagcgccgaggac
tacgtccaccggatcggccggaccggccgcgcgggcgcctcgggcgacgcgctgtcgctg
tgcagcccgaacgagcgcaagcagctcgccgacatcgagaagctgatcaagcgcgaccta
ccgctgcagccgctggcgatcgacgcgccggtgcgtgcgcgccgggagcacggcgagcgt
agtgaacgcggtgaacgtagcgagcgcggtgaacgcggtagccgtgacgagtcgcgcgcg
ccgcgccgcgcgcacggcggtgaacgcagccatcatcaccattcgcgtcgtgaagcgccg
atcgacgagtttttcctcaagccctacgagccggcgccgagcgcgcgtcagccagaagag
gcgaccaagcccgcgcagccggagaagaagtcgaagcagccgctcgcggctctgcttggc
ggcttcgggatgccgcgccgctcgtcgtcgtaa
DBGET
integrated database retrieval system
