Burkholderia plantarii PG1: BGL_1c31960
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Entry
BGL_1c31960 CDS
T03632
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgp
Burkholderia plantarii PG1
Pathway
bgp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGL_1c31960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgp03019
]
BGL_1c31960
Enzymes [BR:
bgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BGL_1c31960
Messenger RNA biogenesis [BR:
bgp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BGL_1c31960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
HI1480
CMS1
Utp25_C
DegT_DnrJ_EryC1
Sacchrp_dh_NADP
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AJK47671
UniProt:
A0A0B6S600
LinkDB
All DBs
Position
1:3676860..3678356
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AA seq
498 aa
AA seq
DB search
MSFASLGLAEPLVRAVNELGYNEPTPIQTQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLNAVQATNANGKRPVRALILTPTRELAAQVEESVRAYGKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDVSQLDILVLDEADRMLDMGFIHDIKRVLAKLPP
KRQNLLFSATFSDEIKALADNLLDSPALIEVARRNTTAETIAQKIHPVDRDRKREMLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISALAIHGNKSQSARTRALSEFKAGTLQVL
VATDIAARGIDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGANGEAVSLVCVDEKPLLRD
IERLIKREIPQQVIAGFEPDPNAKPEPIQRRSGGGGGGGGGRQPQGGGQGKPQAARRDGQ
PGAGAGKPAARPAAKPVKAAGGGNAGAAKPAAKAAKPRAPQAGGARPAGGGGGNGNGGQA
ANRGRSGRGGSGGGQRGH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgcttccctcggcctcgccgaacccctcgtgcgagccgtcaacgaactcggc
tacaacgaaccgactccgatccagacccaggcaatcccggccgtgctcggcggcggcgac
ctgctggccggcgcgcagaccggcaccggcaagaccgccggcttcacgctgccgatcctg
cagcgcctgaacgcggtccaggccaccaacgcgaacggcaagcgccccgtgcgcgcgctg
atcctcacgcccacccgtgaactggccgcgcaggtcgaggaaagcgtgcgcgcctacggc
aagtacctgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gacgcgctgaagcgcggcgtcgacatcgtggtggccacccccgggcgcctgctcgaccac
atgcagcagaagaccatcgacgtctcgcagctcgacatcctggtgctcgacgaagccgac
cgcatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccgccc
aagcgtcagaacctgctgttctcggccaccttctccgacgagatcaaggcgctcgccgac
aacctgctcgattcgccggcgctgatcgaggtcgcgcgccgcaacaccaccgccgagacc
atcgcgcagaagatccacccggtcgaccgcgaccgcaagcgcgagatgctcacgcacctg
atccgcgagcacaactggttccaggtgctggtgttcacgcgcaccaagcacggcgcgaac
cggctcgccgagcagctgaccaaggacggcatcagcgcgctcgcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctcagcgaattcaaggccggcacgctgcaggtgctg
gtggccaccgacatcgccgcgcgcggcatcgacatcgaccagctgccgcacgtggtcaac
tacgagctgccgaacgtgccggaggactacgtccaccggatcggccgcaccggccgcgcg
ggcgcgaacggcgaggccgtgtcgctcgtctgcgtcgacgagaagccgctgttgcgcgac
atcgagcggctcatcaagcgcgagattccgcagcaggtgatcgcgggcttcgagcccgac
ccgaacgccaagccggagccgatccagcgccgcagcggcgggggcggtggcggtggcggc
gggcgtcagccgcagggcggcggccagggcaagccgcaggcggcacgccgcgacggccag
ccgggcgcgggggctggcaagccggccgcgcgcccggccgccaagccggtcaaggccgcg
ggcggcggtaacgccggtgccgcgaagccggccgccaaggcggccaagccgcgcgcaccg
caagcgggcggcgcacggccggccggcggcggtggcggcaatggcaatggcgggcaggcg
gcgaatcgcggtcgctcgggccgtggtggtagcggcggcggtcagcgcgggcactga
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