Burkholderia plantarii PG1: BGL_1c32900
Help
Entry
BGL_1c32900 CDS
T03632
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bgp
Burkholderia plantarii PG1
Pathway
bgp02020
Two-component system
bgp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bgp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BGL_1c32900
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BGL_1c32900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgp03021
]
BGL_1c32900
Transcription machinery [BR:
bgp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BGL_1c32900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF2344
HTH_IclR
HTH_38
HTH_23
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AJK47765
UniProt:
A0A0B6S377
LinkDB
All DBs
Position
1:3784049..3785560
Genome browser
AA seq
503 aa
AA seq
DB search
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAVAQNPLLENDDEWIASPLRV
AADGSLIAQTPPSSTPEPMQGASSGSDSSSGERSERDDASGGDDYDSYNSGDNDSGQWNL
DDYGRASGASDDDDLPPLQVHETSTSLRDHLSAQLRVTQASPRDRALITFLIESLDDDGY
LGATLDEVHADLPEELEVELDELAAALALLHSFDPAGVGARSASECLRLQLIRLDPSPTR
ALALDIVSQHLELLAARDFTRLRKQLKANDDELRDAHALIRSLEPFPGAAYGKAEADYVV
PDIMVKKSGQNWLAELNPEVVPKLRINHLYANILRNSRGDPGAGSLKQQLQEARWLIKNI
QQRFETILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYMLTP
FGTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDPKSPLSDSRIAELLAEQGFVV
ARRTVAKYREALRIPAVNLRKSL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagcctccaactccgcctgtcgcagcacctcgcgctgaccccccagttgcag
cagtcgatccggctgctgcaactgtcgacgctcgaactgcagcaggaagtcgcgatggcc
gtcgcgcagaacccgctgctcgaaaacgacgacgaatggatcgcgagcccgctgcgcgtg
gccgccgacggctcgctgatcgcgcagacgccgccgtcctcgacgcccgagccgatgcag
ggcgcctcgtccggctccgactcgtcctcgggtgagcgcagcgaacgcgacgatgcctcg
ggcggcgacgactacgacagctacaacagcggcgacaacgattcgggccagtggaatctc
gacgactacggccgcgcctcgggcgcctccgacgacgacgatctcccgccgctgcaagtc
cacgagacctcgacctcgctgcgcgaccatctgtcggcgcagctgcgcgtcacgcaggcg
agcccgcgcgaccgcgcgctgatcacgttcctgatcgaatcgctcgacgatgacggctac
ctcggcgcgacgctcgacgaagtccacgccgacttgccggaagaactcgaggtcgaactc
gacgagctggccgccgcgctcgcgctgctgcacagcttcgatccggccggcgtcggcgcc
cgttcggcgtccgaatgcctgcgcctgcagctgatccggctcgatccgtcccccacgcgt
gcgctcgcgctcgacatcgtctcccagcacctcgaactgctcgccgcgcgcgatttcacg
cggctgcgcaagcagctgaaggcgaacgacgacgagctgcgcgacgcgcatgcgctgatc
cgctcgctcgagccgttcccgggcgcggcctacggcaaggccgaggccgactacgtggtg
cccgacatcatggtcaagaagagcggccagaactggctcgcggagctgaacccggaggtt
gtgccgaaactgcgcatcaaccacctgtacgccaacatcctgcgcaacagccgcggcgat
ccgggtgccggctcgctgaaacagcagctccaggaagcgcgctggctgatcaagaacatc
cagcagcgattcgagacgatcctgcgtgtcgcgcaggcgatcgtcgagcgtcagaagaac
ttttttgcacatggcgaaatcgccatgcgccccttggttttgcgggaaatagctgatacg
ctgggcctacacgagtcaactgtctcgcgtgtgacaaccggcaagtacatgctgaccccg
ttcggcactcttgaatttaagtacttcttcggatcgcacgtttcgacggataccggtggc
gccgcctcatccacggcgatccgcgccctcatcaagcaactgataggagccgaagacccg
aaatctcctctatcggacagccgaatcgccgaactgctggcggaacagggattcgtggtc
gcgcgccgcacggtcgcgaagtatcgcgaagccctcaggatcccggcagtcaacctgcgc
aagtctctgtag
DBGET
integrated database retrieval system
