Bradyrhizobium guangdongense: X265_00250
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Entry
X265_00250 CDS
T05902
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bgq
Bradyrhizobium guangdongense
Pathway
bgq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X265_00250 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgq03019
]
X265_00250 (pnp)
03016 Transfer RNA biogenesis [BR:
bgq03016
]
X265_00250 (pnp)
Enzymes [BR:
bgq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
X265_00250 (pnp)
Messenger RNA biogenesis [BR:
bgq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
X265_00250 (pnp)
Transfer RNA biogenesis [BR:
bgq03016
]
Prokaryotic type
tRNA degradation factors
X265_00250 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
Motif
Other DBs
NCBI-ProteinID:
QAU36289
LinkDB
All DBs
Position
57030..59192
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKHSVEIDWGGRPLKLETGKIARQADGAVIATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIATVLSH
DMENDPDIVALVASSAALTLSGAPFKGPIGAARVGFANDEFILNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTVIDNAA
LEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKVIAHYFPEGQEPKYDKLRIAAVFKE
LEAKIVRWNILDTGKRIDGRDVKTVRNIIAEVGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPMKRPTAGIAMGLILEDKRYAVLS
DILGDEDHLGDMDFKVAGTEQGITSLQMDIKIEGITEEIMKVALAQAKDGRIHILGEMAK
ALTNARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASDPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLAANRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEGKDKGGEGEKAPREAAGE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcattcagtcgagatcgactggggcggacgccctctcaagctcgaaacc
ggcaagatcgcccgccaggctgatggcgccgtcatcgccacctatggcgagaccgtggtg
ctcgccaccgtcgtcgcggcgaaggcgccgcgtgaaggcgtcgatttcctgccgttgacc
gtcgactaccaggaaaagacctacgcagccggccgcattcccggcggctatttcaagcgc
gagggccgtccgaccgaaaaggagacgctggtctcccgcctgatcgaccgtccgatccgc
ccgctgttcgtcgacggctggcgcaacgagacccaggtgatcgccaccgtgctgtcgcac
gacatggagaacgatcccgacatcgtcgccctggtggcctcctcggccgcgctgaccctg
tcaggcgcgccgttcaagggcccgatcggcgcagcccgcgtcggcttcgccaatgacgag
ttcatcctcaacccgacgctcgacgagatggtcgacacccagctcgacctagtcgtcgcc
ggcaccgccgacgccgtgctgatggtggaatcggaagccaaggagctgaacgaagacatc
atgctcggcgccgtgatgttcggtcaccgccacttccagcccgtcatcaacgcgatcatc
gagctcgccgagaaggccgccaaggagccgcgcgaagtcaccgtgatcgacaatgccgcg
ctcgagaaggaaatgctcggcctcgtcgagcaggagctgcgcgccgcctacgccattccg
gtcaagcaggatcgctacgccgcggtcggcaaggtcaaggaaaaggtgatcgcccactac
ttccccgaagggcaggagccgaaatacgacaagctgcgcatcgctgccgtcttcaaggag
ctcgaggcgaagatcgttcgctggaacatcctcgataccggcaaacgcatcgacggccgt
gacgtcaagacggtgcgcaacatcatcgccgaagtcggcgtgctgccccgcgcccacggc
tcggcgctgttcacccgcggcgagacccaggcgatggtcgtgaccacgctcggcaccggc
gaggacgagcagtacatcgacgcgctgtcgggaacgtacaaagagacgttcctgctgcac
tacaacttcccgccctactcggtcggcgagactggccgcctcggcggtaccaagcgccgc
gagatcggccacggcaagctcgcctggcgcgcgatccacccggtgctgccgccgcatcac
gagttcccctacaccgtgcgcgtggtctcggagatcaccgaatccaacggctcctcgtcg
atggcttcggtctgcggcgcttcgctcgcgctgatggacgccggcgtaccgatgaagcgg
ccgaccgcgggcatcgcgatgggcctgatcctcgaggacaagcgctacgcggttctctcg
gacatcctcggtgacgaggaccatctcggcgacatggacttcaaggtggccggtaccgag
cagggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaagagatcatg
aaggtggcgctggcccaggccaaggacggtcgtatccacatcctcggcgagatggccaag
gcgctcaccaacgcccgcgccgagctcggcgaatacgcgccccgcatcgagaccttcaag
atcgccacggacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcctcc
tccgacggcgaggcgatgaaggccgcgatcaagtggatcaagtcgatcgcatccgatccg
gaagtcggccagatctatgacggcaccgtcgtcaaggtgatggagttcggcgccttcgtg
aacttcttcggctccaaggacggcctcgtccacatcagccagctcgcggccaaccgcgtg
cagaagacctccgacgtcgtcaaggaaggtgacaaggtcaaggtcaagctgctcggcttc
gacgaccgcggcaagacccgcctgtcgatgaaggtcgtcgaccagaccaccggcgaagac
ctcgaaggcaaggacaagggcggcgagggcgagaaggccccgcgcgaagcggccggcgag
taa
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