Bradyrhizobium guangdongense: X265_03540
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Entry
X265_03540 CDS
T05902
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bgq
Bradyrhizobium guangdongense
Brite
KEGG Orthology (KO) [BR:
bgq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgq03032
]
X265_03540
03400 DNA repair and recombination proteins [BR:
bgq03400
]
X265_03540
Enzymes [BR:
bgq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
X265_03540
DNA replication proteins [BR:
bgq03032
]
Prokaryotic type
DNA Topoisomerases
X265_03540
DNA repair and recombination proteins [BR:
bgq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
X265_03540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
QAU36874
LinkDB
All DBs
Position
complement(754886..755989)
Genome browser
AA seq
367 aa
AA seq
DB search
MLRETRNEEQVLDRTAEVAATIAEEGLRYVSDSAPGYTRKRTGTTFSYYDKDGKRITDAA
VIRRIKSIGIPPAYESVWICPSANGHIQATGLDARGRKQYRYHAKWRELRDQNKYEHIVQ
FAAALPALRDRVAADMKLEGLPREKVLATIVSLLEKTLIRVGNAEYAEKNKSYGLTTMRR
KHVAVGRGVLRFDFTGKSGKQWKLRVEDKRIAAIVKRCAEIPGHELFKYLDDDGQPRTVD
SGDVNAYIKDITGEDFSAKYFRTWAGTVLAALALTEFKKYDSQAEAKRNVVAAIESVSKQ
LGNTPAICRKCYVHPEVLNAYMSGDLVKMIEAKIARKFKRQYAKLTSDEVMVLAFLRKRL
DSLKAPD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctccgagagactcgcaacgaagaacaggttctggaccgcaccgcagaggtcgcagcc
accattgcggaagaaggccttcgctatgtcagcgactccgcgcccggttacactcgcaag
cggacggggactaccttcagctactacgacaaggacggcaagcgcatcaccgatgccgcc
gtcatccggcgcatcaagtccatcggtatcccgccggcctatgaatctgtctggatctgc
ccctcagcgaatggccacatccaggcgaccggcctcgatgcgcggggtcgcaagcagtac
cgttaccacgcaaaatggcgcgagctgcgcgaccagaacaagtacgaacacatcgtccag
ttcgctgccgcgctgcccgcgctgcgcgaccgtgtcgcggccgacatgaagctggaaggg
ctacctcgcgagaaggttctggccacgatcgtcagtcttctggagaagactttgatccgg
gtcggaaacgccgagtatgccgagaaaaacaaatcctacgggctcaccacgatgcgacga
aagcacgttgcggtgggccgcggcgtgcttcggttcgacttcacgggcaaatcgggcaaa
cagtggaaacttcgggtcgaggacaagcggattgccgccatcgtgaagcgctgcgcggag
atcccgggacatgagctcttcaagtacctggacgacgacgggcagccgcgtaccgtcgat
tccggcgacgtcaatgcctacatcaaggacatcacaggcgaggacttcagcgccaagtat
ttccgcacttgggcggggacggttctggcggcgttggcgctgaccgagttcaagaagtac
gacagccaggccgaggcgaagcgcaacgtcgtcgccgcgatcgaaagcgtctccaagcag
ctcgggaatacgccggccatttgccgcaagtgctacgtgcacccggaagtcctgaacgcc
tacatgtccggtgatcttgtcaagatgatcgaagccaagatcgctcggaagttcaagcga
cagtatgccaagctcacgtcggatgaagtcatggtgttggcgtttctccgcaaacgcctc
gattctttgaaggcccccgactag
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