Bradyrhizobium guangdongense: X265_06660
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Entry
X265_06660 CDS
T05902
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgq
Bradyrhizobium guangdongense
Pathway
bgq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X265_06660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgq03019
]
X265_06660
Enzymes [BR:
bgq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
X265_06660
Messenger RNA biogenesis [BR:
bgq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
X265_06660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
QAU37392
LinkDB
All DBs
Position
complement(1381469..1383016)
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AA seq
515 aa
AA seq
DB search
MTSFQDFGLAEPIARALAEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPI
LHRLLENRVKPQPKTARVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVR
ALMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPIK
RQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAERINQRIVQVDFSAKPAFLTKLL
KDEPINRALVFTRTKHGADKVVKTLERAGIAASAIHGNKSQNHRERTLAQFRSGEIRTLV
ATDIAARGIDVDGITHVINFDLPNVPETYVHRIGRTARAGADGTAISLVAGGEELSYLRD
IERLIRVVLPREDLRTDAGRRDTGAPAPQQRQGRPGGRPGQRPQGARHGDGRRGEERHGD
GRHHSSSKPSDGRPGEGRHGEGRPGDSRHVDGRAGNGSKGSRRRRSGGKMHSPPNDRSEQ
RSAHSAGAPNGIQGVAFLRRESRPNGHPNRKPHSH
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgacttcgtttcaggacttcggcctcgccgaacccatcgcacgtgctctcgccgaagag
aattacgtcacccccacccccatccaggcccagacgatccccaccgcgctgaccggccgc
gatgtcgtcggcatcgcccagaccggcaccggcaagaccgcgtccttcgcgctgccgatc
ctgcaccgcctgctcgagaaccgcgtcaaaccgcaacccaagacggcgcgcgtcctggtg
ctgtcgcccacccgcgaactttcggggcagatcctcgacagcttcaacgcctatggccgc
cacatccgcctgtcctcgacgctcgccatcggcggcgtgcctatgggccgccaagtgcgc
gccctgatgcagggcgtcgaggtgctggtcgccacccctggccgcctgctcgacctcgtg
cagagcaatgggctgaagctcggcagcgtcgaattcctcgtgctcgacgaggccgaccgc
atgctcgacatgggcttcatcaacgacatccgcaaaatcgtcgcgaaactcccgatcaag
cggcagacgctgttcttctccgccaccatgccgaaggacatcgccgagctcgccgattcc
atgctgcgcgatccggcccgcgtcgcggtgaccccggtgtcctcgaccgcggagcgtatc
aaccagcgcatcgtccaggtggacttctcggccaagcccgccttcctgaccaagctcctg
aaggacgagccgatcaaccgcgcgctggttttcacccgcaccaagcacggcgccgacaag
gtggtgaagacgctcgaacgggccggcattgccgccagcgccattcacggcaacaagtcg
cagaaccatcgcgaacggacactggcgcagttccgctccggcgagatccgcaccctggtc
gccaccgacatcgccgcccgcggcatcgacgtcgacggcatcactcacgtcatcaatttc
gacctgcccaacgtgcccgagacctatgtgcaccgcatcggccgcaccgcgcgcgccggt
gccgacggcaccgcgatctcactggtcgccggcggcgaggagctcagctatctccgcgat
atcgagcggctgatccgggtggtgctgccgcgcgaggatctgcgcaccgatgccggccgc
cgcgatacgggcgcgcccgcgccgcagcagcggcagggccggccgggcggccgcccgggc
cagcgtccgcaaggcgcacgccatggcgatggacggcgtggtgaggaacggcacggcgac
ggacgtcaccacagctccagcaagcccagcgacggacggcccggtgagggccgccatggc
gaggggcgcccgggcgacagcaggcatgtcgacggaagggccggcaacggctcgaaggga
tctcgccgccgccgctccggtggaaagatgcattccccgccaaacgaccgctcggaacag
cgttccgcgcatagcgccggagcccctaatgggatacaaggcgtggcctttttgcgccgg
gagagtcggccgaacggccacccgaaccgcaaaccccattcgcactag
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