Bradyrhizobium guangdongense: X265_15865
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Entry
X265_15865 CDS
T05902
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bgq
Bradyrhizobium guangdongense
Pathway
bgq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X265_15865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgq03019
]
X265_15865
03009 Ribosome biogenesis [BR:
bgq03009
]
X265_15865
Enzymes [BR:
bgq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
X265_15865
Messenger RNA biogenesis [BR:
bgq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
X265_15865
Ribosome biogenesis [BR:
bgq03009
]
Prokaryotic type
rRNA helicases
X265_15865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QAU42728
LinkDB
All DBs
Position
3325827..3327830
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AA seq
667 aa
AA seq
DB search
MSFPALTPPLARALAERNYDSPTPVQLAVLGEDAIDRDLLVSAQTGSGKTVAYGLAMAKD
LLGDAERFGQAAAPLALIVAPTRELALQVQRELTWLYELAGARVVSCVGGMDPRREQREL
AAGAHIVVGTPGRLCDHLRRGRLDISELKVVVLDEADEMLNLGFREDMEFILETTPETRR
TLLFSATFPRGIVALAKQYQQDAFRIEVAGDEGGHADIEYRAIRVAPGDVEHAAVNVLRF
YEAPSALVFCNTRDAVRHLQAALLERGFSVVALSGELTQNERTLALQSLRDGRARVCVAT
DVAARGIDLPSLDLVIHADLPNDPEVMQHRSGRTGRAGRKGVSVLLVAPVRRRRAEVLLN
LSGIEANWGTAPQADEIRKLDHERMKDVLFTEETTADDLELAKALLAERPAEEIAAALAR
LYRARLPSPEDIIDPGEDRGRRESRHREDRASRGEDRSERPRAKPGKGSSKHVMAEPTVW
FRAAIGRRKNAEARWLLPMICRRGGIDKRDIGAIKIMDTTTEFEISERVAEAFAVKVKRP
DKEDSIRIEPMTGALQDHAAVGKPARVPRRDERDDDHVVRRSDDPWNEPKQYDAPRRKPD
AKHQGKPHAKPYAKPHVKSHEGGKFGKPAFGKKNKTSGNKSGDSKYAPSVTEWPGAPGKK
GKKKRRG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctttccggccctcaccccgccgctcgcccgtgccctggctgagcgcaattatgat
tcaccgactccggtccaacttgccgtgctcggcgaggatgcgatcgaccgcgatctcctg
gtctccgcccagaccggctcgggcaagacggtcgcttacggcttggccatggccaaggac
ctgctcggtgatgccgagcggttcgggcaggccgcagcaccgctcgcgctgatcgtcgcg
ccgacccgcgagctcgccttgcaggtccagcgcgagctcacctggctctacgagcttgct
ggggcgcgcgtcgtctcctgcgtcggcggcatggacccgcgccgcgagcagcgcgagctt
gccgcgggcgcccatatcgtcgtcggcacgcccggccggctgtgcgatcatctgcgccgc
ggccgcctcgacatctcggaattgaaggtcgtcgtcctcgatgaggccgacgagatgctc
aatctcggctttcgcgaggacatggagttcatcctcgagaccacgccggagacgcgccgc
acgctgctgttctcggcgacgttcccgcgcggcatcgtcgcactcgccaagcagtatcag
caggacgcgttccggatcgaggtcgcgggcgacgagggcggtcacgccgatatcgagtac
cgcgccatccgggtcgcgcccggtgatgtcgagcatgcggccgtcaacgtgctgcgcttc
tacgaggcgccgagcgcgctggtgttctgcaacacccgcgatgccgtcaggcatttgcag
gcggcgctgctcgagcgcggcttctccgtggtcgctctgtcgggcgagttgacgcagaac
gagcgcaccttggcgctccagtcgctcagggacgggcgcgcccgcgtttgcgtcgcgacc
gacgttgcggcccgcggcatcgacttgccgagcctcgacctcgtcattcacgcagatctg
cccaacgaccctgaagtgatgcagcatcgctccggccgcaccgggcgcgcgggccggaag
ggcgtcagcgtcctgctggtggcgcctgtacgacgccggcgcgcggaggttttgctgaat
ttgtccggaatcgaagcgaactggggtacggcgccgcaggcggatgagattcgcaagctc
gatcatgagcgcatgaaggacgtgctgttcaccgaggagacgactgccgacgatctcgaa
ctggcgaaggccctgctggccgagcggccggccgaggagatcgcggcggcgctggcgcgg
ctctatcgcgcgcggctgccgtcgccggaagacatcatcgatcccggcgaggatcgcgga
cggcgcgagagtcgtcatcgcgaggatcgcgcatcccgtggcgaggaccgctccgagcgg
ccccgtgccaaaccagggaagggatcgtcgaagcatgtcatggcggagcccaccgtctgg
ttccgggccgccatcggccgccgcaagaatgcggaggcacgctggctactgccgatgatc
tgccgccgcggcggcatcgacaagcgcgacatcggggcgatcaagatcatggacactacc
accgagttcgagatctccgagcgcgtcgcggaggccttcgccgtcaaggtcaagcgtccg
gacaaggaagacagtatccgcatcgagccgatgacgggtgcgctgcaagaccatgctgcc
gtgggcaagccggcacgcgtgccgcggcgcgatgaacgcgacgacgaccacgtcgtgcgc
cgcagcgacgatccctggaacgagccgaagcagtacgacgcgccgcggagaaagcccgac
gccaagcatcagggcaagccgcacgccaagccgtatgccaagcctcacgtcaagtctcac
gagggcggcaagttcggcaagccggcgttcggcaagaagaacaagacatcaggtaacaaa
tccggtgactccaaatatgcgccgtcggtcaccgaatggccgggcgcgccgggcaagaaa
ggcaagaagaagcgccgcggctga
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