Bradyrhizobium guangdongense: X265_18050
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Entry
X265_18050 CDS
T05902
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bgq
Bradyrhizobium guangdongense
Pathway
bgq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X265_18050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgq03019
]
X265_18050
03009 Ribosome biogenesis [BR:
bgq03009
]
X265_18050
Enzymes [BR:
bgq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
X265_18050
Messenger RNA biogenesis [BR:
bgq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
X265_18050
Ribosome biogenesis [BR:
bgq03009
]
Prokaryotic type
rRNA processing factors
X265_18050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
CDC45
Zn_ribbon_19
Motif
Other DBs
NCBI-ProteinID:
QAU39348
LinkDB
All DBs
Position
complement(3762749..3765853)
Genome browser
AA seq
1034 aa
AA seq
DB search
MPNKMLIDATHPEETRVVVVRGNRVEEFDFETAQRKQLRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPVADRQALIEAEEQAHREAEEESENRSHGRRRSRHRNAR
RRGHGERVRSDIVEGLEAGADPAAQPVEGDVQPEFADATSHEGEHLHADAEHHGEHEDHD
HHDHDDHGHDNHEHDDHPRTHDEHAHDHDHDDHGDDHEHDHHGDDHHADEAPAPVAAIGA
EPVVAAETVAEPQEAPSVEAHGEDFAEVVTSAAEPADAVYAAGEPTEAPHGEAAEAAGED
DEDEEDGEEAEEEVVESVGGDDVLEEVPERTFRPRRQYKIQEVIKRRQVMLVQVVKEERG
NKGAALTTYLSLAGRYAVLMPNTARGGGISRKITSAQDRSRLKEVVQDLDVPEGMGIILR
TAGAARTKPEIKRDFEYLIRMWETVRDLTLKSQAPTLVYEEGSLIKRSLRDLYNKEIDEI
QVAGEAGYREARDFMKMLMPANVSAVKQYRDGQPLFSRMGVESQLDAMFSPTVQLRSGGY
IVINQTEALVSIDVNSGRSTREHHIEDTALKTNLEAAEEVARQLRLRDLAGLIVIDFIDM
DEKRNNRSVERKLSDCLRQDRARIQVGRISHFGLLEMSRQRIRASVLESSTDPCPHCGGT
GHVRSVSSVALQLLRGLEEILMKGATHNLVVRTRTDVALYVLNHKRGHLRDLENGFKVTL
SVIADQSVSGPQAYVIDRGEQVHTLEAAKALLAAQAAASPPPLPEEAYDDEDLFDLETES
EVETDETEGLGDEQASGEAASEGDGQRRKRRRRRRGRGGQRDGELREDSPATLPEPAMTA
GEGDEDAESEQDGEEGEEQAARGEQQGGGERRRRRGRRGGRRRRGGNEEGLAGSIGDEIG
GSNPPPEATEAVADFDGSSASESAPSIAHAKHMPSAETSQAEPQAPVQTPVQPAPVAVAE
EEPAADDRATRRRSTVREKVSFLTSSPSEPAPPVAAEPVAAPAPAPEPAPDAAAETPAAQ
RRAGWWSRRFGGGE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacaagatgttgatcgatgccacccacccggaagagacccgggtcgtcgtggtc
cgcggcaatcgcgtcgaagagtttgacttcgagaccgcgcaacgcaagcaactgcgcggg
aatatctacctcgccaaggtcaccagggtcgaaccctcgctccaggccgccttcgtcgaa
tatggcggcaaccgccacggcttcctcgccttcagcgaaatccatcccgactactaccag
atcccggtcgccgaccggcaggcgctgatcgaggccgaggagcaggcccatcgcgaagcc
gaggaagagagcgagaaccgctcccacggccgtcgtcgctcgcgccaccgcaacgcccgc
cggcgtggccatggcgagcgcgtccgcagcgacatcgtcgaaggtctcgaggccggcgcc
gatcccgcggcccagccggtcgagggcgacgttcagccggagttcgccgacgccacgtcg
catgagggcgagcacctgcacgccgacgccgaacaccacggcgagcacgaagaccacgat
catcacgaccacgacgatcacggccatgacaatcatgagcacgatgatcatcctcgcacc
catgacgagcacgcgcacgatcatgatcatgacgaccatggcgatgatcacgaacacgat
catcatggcgatgatcatcacgccgacgaggcgcccgcgcccgtcgcggcgatcggcgcg
gagcccgtagttgcggccgagaccgttgccgagcctcaggaggctccgtccgttgaagcg
catggcgaggactttgccgaagtcgtgacctcggccgccgagccggccgatgccgtctac
gccgctggggagccgacggaggcgccacatggcgaggccgcggaagctgccggtgaagac
gacgaggacgaagaagacggcgaggaagccgaagaggaagtcgtcgaatccgtgggcggt
gacgacgtgctggaagaagtgccggagcgcaccttccggccgcgccgccagtacaagatc
caggaagtcatcaagcgccgccaagtgatgctggtgcaggtggtcaaggaagagcgcggc
aacaagggcgcggcgctgacgacctatctgtcgctcgccggccgctacgccgtcttgatg
ccgaacaccgcgcgcggcggcggcatcagccgcaagatcacctcggcgcaggatcgctcg
cgcctgaaggaagtggtgcaggatctcgacgtgcccgagggcatgggcatcatcctgcgc
accgcgggcgcggcccgcaccaagcccgagatcaagcgcgacttcgaatacctgatccgg
atgtgggagacggtgcgcgacctgacgctgaagtcgcaggctccgaccctggtctacgaa
gagggctcgctgatcaagcgctcgctgcgcgacctctacaacaaggagatcgacgagatc
caggttgccggcgaagccggctaccgcgaagcacgcgatttcatgaagatgctgatgccc
gccaatgtcagcgcggtgaagcaatatcgggacggccagccgctgttctcgcggatgggc
gtcgaaagccagctcgatgcgatgttctcgccgaccgtgcagctgcggtcgggcggttat
atcgtcatcaatcagacggaggcgctggtctcgatcgacgtcaactccggacgatcgacc
cgcgagcaccacatcgaggacactgcgctcaagaccaatctggaagcggccgaagaggtc
gcccgccagcttcgcctgcgcgacctcgctggcctgatcgtcatcgacttcatcgacatg
gacgagaagcgcaacaaccgttcggtcgagcgcaagctgtccgattgcctgcggcaggat
cgcgcgcgcatccaggtcgggcgcatctcgcatttcggcctcttggagatgtcgcgccag
cgtatccgcgccagcgtgctggagagttcgaccgacccctgcccgcactgcggcggcacc
ggtcatgtccggtcggtgtcctcggtggcgctgcaactgctgcgcgggctggaagagatc
ctgatgaagggcgccacccacaatctcgtggtccgtacccgcaccgacgtcgcgctctat
gtgctgaaccacaagcgcggccatttgcgcgacctcgaaaacggcttcaaggtcacgctg
tcggtcatcgccgatcagtccgtcagcggcccgcaggcctacgtcatcgaccgcggcgag
caggtccacacgctggaagccgccaaggcgctgctcgcagcccaggctgccgcaagcccg
ccgccactgcccgaagaggcctatgacgacgaggaccttttcgacctcgagaccgaatcc
gaggtcgagaccgacgaaactgagggtctcggcgatgagcaggcctcaggtgaagccgcg
tccgaaggtgacgggcagcgccgcaagcgccgccgccgtcgtcgaggtcgcggcggtcag
cgcgacggcgagcttcgcgaggacagcccagccacgcttcccgagccggcaatgaccgcc
ggcgaaggcgacgaggatgccgagtccgagcaagacggtgaggaaggcgaggaacaggcc
gcccgtggcgagcagcagggtggcggcgagcgccggcgccggcgcggtcgcaggggtgga
cgtcgtcggcgcggcggcaatgaggaaggcctcgccggatccatcggcgacgaaattggc
ggcagcaatccaccgccggaagcaaccgaggcagtggccgacttcgacggctcgtctgcc
agcgagtccgctccgtcgattgcgcatgcgaagcacatgccctccgctgaaacgtcgcag
gccgagcctcaggcacccgttcaaacgccagttcagcctgcgcccgttgctgtcgcggaa
gaagagcccgcggccgatgacagggccacacgccgtcgctcgaccgttcgcgagaaggtg
agcttcctgacgagcagcccgagcgagcctgcgcccccggttgcagctgaacccgttgca
gcgcccgcgcctgcgccggaacccgcgccggacgcggcagcggagacgccggcagcccag
cgtcgggccggctggtggtcccgccgtttcggcggcggcgaataa
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