Bradyrhizobium guangdongense: X265_22885
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Entry
X265_22885 CDS
T05902
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bgq
Bradyrhizobium guangdongense
Pathway
bgq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
X265_22885 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgq03021
]
X265_22885 (rpoC)
03400 DNA repair and recombination proteins [BR:
bgq03400
]
X265_22885 (rpoC)
Enzymes [BR:
bgq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
X265_22885 (rpoC)
Transcription machinery [BR:
bgq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
X265_22885 (rpoC)
DNA repair and recombination proteins [BR:
bgq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
X265_22885 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
QAU40200
LinkDB
All DBs
Position
complement(4732627..4736823)
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA
MIGAEAIRELLKGMDLEKLEVSLRAEMQETDSDIKHKKLAKRLKIVEAFRHSGNKPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKLFGDMAELEHALH
AKVIHLHTKIKYRWEGMDETGKVSKRWIETTAGRVMLGNLLPKNPRISYEIINKLMTKRE
ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHGKWKIVDTTRTL
AKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKAMMKEISATKKTASGADADINSIYM
MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIITQSDCGTKLGIKMRAIVDAGTVVASLGSRILGRTA
CEDVRDSSGKVIIKRDTLMEESHLEAIQQGGVQEVKIRSALTCELVNGICGKCYGRDLAR
GTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVEANFDGKIVIRNKAIA
RNSEGHLIAMVRNMVVAVVDADGTERATHRVQYGSRLHVDEGDMVKRGQRIVEWDPYTRP
LLTEVEGTIGFEDLVEGQSISETLDEATGIAKRVVIDWRSTRGGSDLRPAIVVKGKDGKV
LKLARGGDARYMLSVDAILSVDVGAKVNPGDILARVSTESAKTRDITGGLPRVAELFEAR
RPKDAAIIAEIAGTIRFGRDYKNKRRISIEPMDKTDEPREYLIPKGKHIHLQDGDVVEKG
DFIVEGNPAPHDILAVKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEIT
DQGDTDMISGEQVDKIEFDALNEKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQE
TTRVLTEAAVNGKIDPLEGLKENVIVGRLIPAGTGASMAKIREVAMKRDKLILDEREKQA
TVAPPAPEAELPALPPAE
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaaattatgaatctctttaacccgacgacgccggctcaggtcttcgaccag
atccggatctcgatcgcgtccccggagaagattctgtcctggtcctacggcgagatcaag
aagccggagaccatcaactaccgtaccttcaagcccgagcgcgacggcctgttctgcgcc
cgcatcttcgggccgatcaaggactacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgctcggtcgaggttacgctgtcgcgcgtccggcgc
gagcgcatgggccatatcgagctcgcggctcccgtcgcccacatctggttcctgaagtcg
ctgccgtcgcgcatcggcctcctgctcgacatgacgctgaaggatctcgagcggatcctc
tacttcgaatactacgtcgtgctggagccgggcctcaccgcgctgaaggaccgtcagctg
ctgtcggaagacgagtatctgaaggcgcaggacgaatacggccaggacagcttcaccgcc
atgatcggcgcggaagcgatccgcgagctgctcaagggcatggacctcgagaagctcgaa
gtgtcgcttcgcgccgagatgcaggagaccgactccgacatcaagcacaagaagctcgcc
aagcgtctgaagatcgtcgaggccttccgccactccggcaacaagccggaatggatgatc
ctgactgtcgttcccgtgatcccgccggacctgcgtccgctggtgccgctggacggcggc
cgcttcgcaacctccgacctcaacgacctgtaccgccgcgtcatcaaccgcaacaaccgc
ttgaagcggctgatggagctgcgcgcgcccgacatcatcatccgcaacgagaagcgcatg
cttcaggaagcggtcgatgcgctgttcgacaacggccgccgcggccgcgtcatcaccggt
gccaacaagcgcccgctgaagtcgctcgccgatatgctcaagggcaagcagggtcgtttc
cgtcagaacctgctcggcaagcgcgtcgactattccggccgttcggtgatcgtggtcggt
cccgagctgcgcctgcatcagtgcggcctgccgaagaaaatggctctcgagctgttcaag
ccgttcatctactcgcggcttgacgccaagggcctgtccaccaccgtgaagcaggcgaag
aagctggtcgagaaggagcggcccgaggtctgggacatcctggacgaggtgatccgcgag
catcccgtgctgctcaaccgcgccccgacgctgcatcgcctgggcatccaggcgttcgag
ccggtgctgatcgagggcaaggcgatccagcttcacccgctggtctgctcggcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgttccgctgtcgctcgaagcgcagctg
gaagcgcgcgtgctgatgatgtcgaccaataacatcctgcatccggcgaacggccagccg
atcatcgtgccctcgcaggacatcgtgctcggtctctactacgtctcgatcatgcgcgaa
ggcctgcccggcgagggcaagctgttcggcgacatggccgagctcgagcacgccctgcac
gcgaaggtcatccacctccacaccaagatcaagtaccggtgggaaggcatggacgagacc
ggcaaggtctccaagcgctggatcgaaaccactgcgggccgcgtcatgctcggcaatctg
ctgccgaagaacccgcgcatctcgtacgagatcatcaacaagctgatgaccaagcgcgag
atctcgggcgtcatcgaccaggtctatcgtcactgcggccagaaggagaccgtgatcttc
tgcgaccgcatcatggcgctcggcttctacaacgcgttcaaggccggcatctcattcggc
aaggacgacatggtcgtgccgcacggcaagtggaagatcgtcgacaccacccgtacgctg
gcgaaggatttcgagcagcagtacaacgatggtctgatcacccatggcgagaagtacaac
aaggtcgtcgacgcctggtcgaaggccacggaagaaatcgccaaggcgatgatgaaggag
atctccgccaccaagaagacggcgagcggagccgatgccgacatcaactcgatctacatg
atggctcactccggtgcccgcggttcgccggcccagatgcgccagctcgccggcatgcgc
ggtctgatggccaagccgtcgggtgagatcatcgagacgccgatcatctcgaacttcaag
gaaggcctctcggttctcgagtacttcaactcgacccacggcgcccgtaagggcctcgcg
gacaccgcgttgaagaccgcgaactctggctacctgacacgtcgtctggtcgacgtcgcg
caggactgcatcatcacgcagtccgattgcggcaccaagctcggcatcaagatgcgcgcc
atcgtcgatgccggcaccgtggtcgcttcgctcggttcgcgcatcctcggacgcacggcc
tgcgaagacgtgcgtgacagctcgggcaaggtgatcatcaagcgcgacacgctgatggaa
gagagccatctggaggccatccagcagggtggcgtgcaggaggtgaagatccgctcggcg
ctgacctgcgaactcgtcaacggcatctgcggcaagtgctacggccgcgacctcgcccgc
ggcacgccggtcaaccacggcgaagcggtcggcgtcatcgcggcgcagtcgatcggcgag
ccgggtacccagctcaccatgcgcactttccacatcggtggtgcggcgcagctcaacgag
cagtcgttcgtcgaagccaatttcgacggcaagatcgtgatccggaacaaggccatcgcc
cgcaacagcgaaggtcacctgatcgcgatggtgcgcaacatggtggtggccgtcgtcgat
gccgacggcaccgaacgtgcgacgcaccgtgtccagtatggctcgcgcctccacgtcgac
gagggcgatatggtcaagcgtggccagcgcatcgtcgagtgggacccgtacacccgtccg
cttctcaccgaagtggaaggcaccatcggcttcgaggatctggtcgaaggccagtcgatc
tcggaaacgctggacgaggccaccggtatcgccaagcgcgtggtcatcgactggcgctcg
acccgcggcggctcggacctgcgtccggccatcgtggtaaagggcaaggacggcaaggtg
ctcaagctcgcccgtggcggcgacgcccgctacatgctgtcagtcgacgccattctctcg
gtcgacgtcggagccaaggtcaacccgggcgacatcctcgctcgtgtctcgaccgaaagc
gccaagacgcgtgacatcaccggcggtctgccgcgggtggcggaactgttcgaggcacgg
cgtccgaaggatgcggcgatcatcgccgagatcgcgggcaccatccggttcggacgcgac
tacaagaacaagcgtcgcatctcgatcgagccgatggacaagaccgacgagccgcgcgag
tacctgatcccgaagggcaagcacatccaccttcaggacggcgacgtcgtcgaaaagggc
gacttcatcgtggaaggcaacccggcgccgcacgacatccttgcggtcaagggcatcgaa
gagctcgcggcctatctggtcaacgaaatccaggaggtctaccggctccagggcgtgctc
atcaacgacaagcacatcgaggtgattgtccgtcagatgctccagaaggtggaaatcacc
gaccagggcgacacggacatgatctccggcgagcaggtcgacaagatcgagttcgacgcg
ctgaacgagaaggccaaggaagagggcaagaagcccgccacgggtacgccggttctgctc
ggcatcaccaaggcgagcctgcagacccgctccttcttctcggcggcctcgttccaggag
accacccgcgtcctcacggaagcggcggtcaacggcaagatcgatccgctcgagggtctc
aaggagaacgtcatcgtcggccggctgatcccggcgggcaccggcgcctccatggccaag
atccgcgaagtcgccatgaagcgcgacaagctgattctcgacgagcgcgagaagcaggcg
accgtcgcgccgccggcgccggaggcggagcttcccgcactgccgcctgcggaataa
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