Bradyrhizobium guangdongense: X265_29420
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Entry
X265_29420 CDS
T05902
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bgq
Bradyrhizobium guangdongense
Pathway
bgq00521
Streptomycin biosynthesis
bgq00523
Polyketide sugar unit biosynthesis
bgq00525
Acarbose and validamycin biosynthesis
bgq00541
Biosynthesis of various nucleotide sugars
bgq01100
Metabolic pathways
bgq01110
Biosynthesis of secondary metabolites
bgq01250
Biosynthesis of nucleotide sugars
Module
bgq_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bgq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
X265_29420 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
X265_29420 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
X265_29420 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
X265_29420 (rfbB)
00525 Acarbose and validamycin biosynthesis
X265_29420 (rfbB)
Enzymes [BR:
bgq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
X265_29420 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QAU41346
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Position
6149724..6150788
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AA seq
354 aa
AA seq
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MRFKGSTIFVTGGAGFIGSAVVRHLLRDTQARVVNIDKLTYAANLESIPDAGTNPRYAFE
KQCICEAASLRKLFEKYQPAAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTLLQEALRYW
RTLSPDGRAQFRFLHISTDEVFGSLGKDGYFTETTPYSPNSPYSASKASSDHLVRAWRET
YDLPTMVTNCSNNYGPYHFPEKLIPHIIIKGLAGEPLPVYGDGQNIRDWLYVEDHAKALA
LVLERGAIGETYNVGGRNERTNLHVVESICDLLDQMSPRAAGSRRGLISFVADRPGHDRR
YAIDASKLERELGWRADENFESGLAKTVRWFFDNKQWWLAILDRGYQQKRIGLG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcaaaggctccacgatcttcgtcacgggcggtgcgggtttcatcggctccgca
gtcgtgcgtcatcttctccgcgacacccaggcgcgcgtcgtcaacatcgacaagctgacc
tatgccgccaatctcgagtcgatccccgacgccgggacaaatccgcgttatgcattcgag
aagcaatgcatttgcgaggcggcctctcttcgcaagctgttcgagaaataccagcccgcc
gccgtgatgaacctcgcggcagaaagccatgtcgatcgttcgatcgatggtcccggcgaa
ttcatccagaccaacatcgtcggtaccttcacgctgctgcaggaagcgctgcgatactgg
aggacgttgagcccggacgggcgcgcgcaattccgcttcctccacatctctaccgacgag
gtgttcggctcgctcggcaaggacggatatttcaccgagaccactccctattcaccgaat
tcgccctattcggcgagcaaggcgtcgtccgaccatctggtccgcgcctggcgtgagacc
tacgaccttccgacgatggtgacgaactgctcgaacaattacgggccctatcactttccc
gagaagctcattccccacatcatcatcaagggcctcgccggagagccgctgccggtttac
ggcgacggtcagaacatccgcgactggctctacgtcgaggatcatgccaaggcgctcgca
ctggtgctcgagcgcggtgcgatcggcgagacgtacaatgtcggcggacggaacgagcgc
accaacctgcacgtcgtggagagcatttgcgatctgctcgaccagatgtcgccgcgcgca
gcgggttcccggcgcggcctgatctcattcgtcgccgaccgtcccggtcacgatcgccgc
tatgccatcgatgcttcgaaactcgagcgcgagctcggatggcgcgctgacgagaatttc
gaaagcggtctcgccaaaacggttcgctggttcttcgacaacaagcaatggtggctagcc
attctcgatcgcggctatcagcagaagcgcatcggcttgggatag
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