Bradyrhizobium guangdongense: X265_31085
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Entry
X265_31085 CDS
T05902
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bgq
Bradyrhizobium guangdongense
Pathway
bgq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bgq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
X265_31085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgq03021
]
X265_31085
Transcription machinery [BR:
bgq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X265_31085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Dict-STAT-coil
Motif
Other DBs
NCBI-ProteinID:
QAU41633
LinkDB
All DBs
Position
complement(6486092..6488239)
Genome browser
AA seq
715 aa
AA seq
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MATKAKTLQAKDKEKDDKAADAPEKDSQDAPSPLLDLSDAAVKKMIKQAKKRGFVTFDQL
NEVLPSDQTSPEQIEDIMSMLSDMGINVTEADDSEGEEEKDEGDDETDNELVEVTQKAVT
EVKKSEPGERTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQA
IIIWRDELNEGKIFLRDIIDLEATYAGPEAKGGMNTAMIAGPAGENGEAAADGSQPAAAA
APAHVAPPAAPPSPTPFRAAQPAAAGGEDKDPGEAAAEADMDEDDEFENQMSLAAIEAEL
KPKVVEIFDKIAESYKKLRKLQEQDIQNQLESTSHGPSLSPHQERKYRKLKDEIIVEVKS
LRLNQARIDSLVEQLYDINKRLVSHEGRLMRLADSHGVAREDFLRNYTGSELDPRWLNRV
SKLSAKGWKNFVHHEKDRIKDLRHEVHQLAALTGLEIVEFRKIVHSVQKGEREARQAKKE
MVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQA
ITRSIADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVL
KIAKEPLSLETPVGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPREERV
LRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaggcaaagacgctgcaggcgaaggacaaggaaaaagacgacaaggcagcg
gacgccccggagaaggactcccaggacgcgccgtctcccttgctcgatctgtccgacgcg
gcagtgaagaagatgatcaagcaggccaagaagcgcggcttcgtgaccttcgatcagctc
aacgaagttttgccgtccgaccagacctccccggagcagatcgaggacatcatgtccatg
ctctcggacatgggcatcaacgtcaccgaagccgacgattctgaaggcgaggaagagaag
gacgagggtgacgacgagaccgataacgagctcgtcgaggtcacccagaaggccgtcacc
gaggtcaagaagagcgagccgggcgagcgcaccgacgatcccgtgcgcatgtatctgcgc
gagatgggcacggtcgagctgctgtcccgcgaaggcgaaatcgccatcgccaagcgcatc
gaggccggccgcgaggcgatgatcgcgggcctctgcgaaagcccgctgaccttccaggcc
atcatcatctggcgcgacgagctcaacgaaggcaagatcttcctccgcgacatcatcgat
ctcgaagccacctatgccggccccgaggccaagggcggcatgaacactgcgatgatcgca
ggtcctgccggcgaaaacggtgaggccgcggccgatggcagccagccggccgcagcggct
gcgcccgcgcatgtcgccccgcccgcagctccgccgtcgccgaccccgttccgcgcggcg
cagcccgccgccgccggtggcgaggacaaggatccgggcgaggccgccgccgaagccgac
atggacgaggacgacgagttcgagaaccagatgtcgctcgcggcgatcgaggccgagctc
aagccgaaggtcgtcgagatcttcgacaagatcgccgagagctacaagaagctgcgcaag
cttcaggagcaggacatccagaaccagctcgagagcacctcgcatggtccctcgctctcg
ccgcaccaggagcgcaagtaccgcaagctcaaggacgagatcatcgtcgaggtgaagtcg
ctgcgcctgaaccaggcgcgtatcgattcactcgtcgagcagctctacgacatcaacaag
cgcctcgtctcgcatgagggccgcctgatgcgtctcgccgacagccacggcgtcgcgcgc
gaggattttctgcgcaactacaccggttctgaattggatccgcgctggctcaaccgtgtg
tcgaaactctccgccaagggctggaagaacttcgtccaccacgagaaggaccgcatcaag
gacctccgtcacgaggtgcatcagctcgccgcgctgaccggcctcgagatcgtcgagttc
cgcaagatcgtgcactccgtgcagaagggcgagcgcgaggcacgtcaggccaagaaggag
atggtggaagccaaccttcgcctcgtgatctcgatcgccaagaaatacaccaaccgcggc
ctccaattcctcgacctgatccaggaaggcaatatcggcctgatgaaggcggtcgataag
ttcgaataccgccgcggctacaagttctcgacctacgccacgtggtggatccggcaggcg
atcacccgctcgatcgccgaccaggcccgcaccatccgcatccccgtgcacatgatcgag
acgatcaacaagatcgtgcgcacgtccaggcagatgctcaacgagatcggccgcgagccg
accccggaagagctcgccgagaagctcggcatgccgctcgagaaggtccgcaaggtcctc
aagatcgccaaggagccgctctcgctggaaacgccggtcggcgacgaagaggattcgcat
ctcggcgatttcatcgaggacaagaacgcgatcctcccgatcgacgccgcgatccagtcc
aacctgcgcgaaaccaccacgcgcgtgctcgcctcgctcaccccgcgcgaagagcgcgtc
ctgcgcatgcgcttcggcatcggcatgaacaccgaccacacgctggaagaggtggggcag
cagttctcggtgacgagagagcgtattcgccagatcgaagccaaggcgctgcggaagctg
aagcatccgtcacggtcgcggaagctgcggagcttcttggataactag
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