Bartonella grahamii: Bgr_00560
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Entry
Bgr_00560 CDS
T00922
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bgr
Bartonella grahamii
Brite
KEGG Orthology (KO) [BR:
bgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgr03016
]
Bgr_00560
Enzymes [BR:
bgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Bgr_00560
Transfer RNA biogenesis [BR:
bgr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Bgr_00560
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
ACS50443
UniProt:
C6AB76
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All DBs
Position
complement(78210..78749)
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AA seq
179 aa
AA seq
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MGRLFSALQIPQQTTQQLVSLQNGLPKAQWINPQNFHVTLSFFGEGESATADALMHAFDT
IKLSPFMLQIDGFEVFGSENAPHSLVVRIEPCEKLNLLHEKMQYIRNKLELKPDERQFIP
HITLARIFDINLEDLSSYLSFQDDFFIPPFEVDHFVLFSSSSPSSESVYLIKGSWSLQR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtctatttagtgcccttcagattcctcaacaaacaacacaacaacttgtatcg
ttgcaaaatggcttaccaaaagcgcaatggatcaacccgcaaaattttcacgtcacctta
tcttttttcggtgaaggtgaaagtgctaccgcagatgcacttatgcacgcctttgataca
ataaagctctctccttttatgctacaaatagatggttttgaagtttttggttcagaaaat
gctccccattctcttgtggttcgcattgaaccttgtgaaaagcttaatcttttacatgaa
aagatgcaatatatccggaataaattagagttaaagcctgatgaaagacaatttattccg
catattactcttgcacgaatatttgatatcaatcttgaagatctttcttcttatctatct
tttcaagatgatttttttatccctccttttgaggtcgatcactttgttttattttcatcg
tcatctccctcaagtgagtccgtgtatcttataaaaggaagttggtcacttcaaagataa
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