Bartonella grahamii: Bgr_12130
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Entry
Bgr_12130 CDS
T00922
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bgr
Bartonella grahamii
Pathway
bgr03030
DNA replication
bgr03430
Mismatch repair
bgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bgr_12130 (dnaE)
03430 Mismatch repair
Bgr_12130 (dnaE)
03440 Homologous recombination
Bgr_12130 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgr03032
]
Bgr_12130 (dnaE)
03400 DNA repair and recombination proteins [BR:
bgr03400
]
Bgr_12130 (dnaE)
Enzymes [BR:
bgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bgr_12130 (dnaE)
DNA replication proteins [BR:
bgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bgr_12130 (dnaE)
DNA repair and recombination proteins [BR:
bgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bgr_12130 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACS51455
UniProt:
C6AE50
LinkDB
All DBs
Position
complement(1358088..1361582)
Genome browser
AA seq
1164 aa
AA seq
DB search
MRVVKNKNKMQENKNSLPRFIHLRVHSAYSLLEGALKIPQIIQQAISDHAPAVAITDTNN
LFGALEFSQHCLAHGVQPIIGCQLTVDFCDENDHSRLAKWRNPSDFCSIVLLAASEIGYA
HLVRLVSRAYLDKRDTDPPHIKANWLSAHSEGIIVLTGGKGGPINLSLAEEKKEHAVERL
IYLKKSFADRLYVELQRHGSYDRRVEADLIELAYAHEIPLVATNEAFFLKREGYEAHDAL
MAVSEGQIVSNPDRKRVTPDHYLKSQDEMVTLFSDLPEALENSVEIALRCHIATPLRKPI
LPRFIEQSANSENTLEVEDSELLNQAKAGLKMRLETIGLAEGYTIADYEQRLDYEISVIT
RMQFSGYFLIVSDFIKWAKVHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLN
PDRVSMPDFDIDFCQERREEVIQYVQKKYGRNQVAQIITFGKLQARAVLRDVGRVLEVPY
RQVDYLTKLIPATPGSQVELADAIKDEPKFEEEKKKDPVVGRALDIALQLEGLYRHASTH
AAGIVIGDRPLWELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKMAVDF
VARKGIKIDLSNIPLNDETTYAMMARGETVGVFQVESSGMRKALIGMKPDRIEDIIALVA
LYRPGPMENIPTYNARKHGEEEIASIHPKIDHLIKETQGVIVYQEQVMQIAQVLAGYSLG
EADLLRRAMGKKIHAEMQKQRTRFVNGAVAGGVDKDQADIIFDLLAKFADYGFNKSHAAA
YAIVSYQTAYMKANYPVEFLAASMTYDMTNTDKLNDFRREALRLGIEVIAPSIQTSHRVF
EVGDNCIYYSLAAIKGVGETVVDHIVACRGDKIFKDLEDFCARVDPRIVNKRAMESLVCA
GAFDCFNIAREVLLANLGTLHARALRILDDNSSGQVDIFGMAGGLKEPLILSQTTSWLPA
EKLYREFQAIGFYFSAHPLEEYQAILDKKRIQTWVNFANAVKGGATAARLAGTVVAKNVR
KTKSGKKMGIIHFSDTSGQYEAVLFSEALSDYEEMLEPGKSFIITVSAENRSEGVSLRIE
TIQSLEQESLKQHKMMRLFIKTVDMLPQIEQNLNLGGNGEVGLILIQEDGLREVEIALPK
RYKVNSHVANAMKLIQGVVDVELS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
gtgagagtggtaaaaaataaaaataaaatgcaagaaaacaaaaattctcttcctcgcttt
attcatttgagagtgcattcagcttattccttgctcgaaggggctttaaaaatcccccaa
attattcaacaggctatttcagatcatgcaccagcggttgctattaccgataccaataat
ttatttggtgctttggaattttcacagcattgtcttgctcatggggtccaacctattatt
ggttgtcagcttactgttgatttttgtgatgaaaatgatcattcacgtttggctaaatgg
cgtaatccttctgatttttgctctattgttctgttggctgctagtgaaattggttatgct
catttggttcgtcttgtgagccgtgcttatcttgataaacgtgatactgatcctcctcat
attaaagctaattggttgtcggcacacagtgaaggaataattgttttaacgggaggcaag
ggaggacctattaatctttctttggcagaagagaaaaaagaacatgctgttgaacgctta
atttatttgaaaaaatcttttgctgatcgtctttatgtggaattacaacggcatggctct
tatgatcggagagtagaagctgatcttattgaattggcttatgcgcatgaaattcctctt
gttgcaacaaatgaagccttttttctgaagagagaagggtatgaagcgcatgatgcgctg
atggctgtttcagaagggcaaatagtctctaatccagatcgcaaacgtgtgacgccagat
cattatttgaagtcacaagatgaaatggttacactcttttctgatcttccagaagcttta
gaaaatagtgttgaaattgcattgcgttgtcatattgccacgcctcttcgaaaaccgata
ttgcctcgttttatagaacaatctgctaattcagaaaatactttggaagtagaagatagt
gagttgttaaatcaggctaaagctggtttgaagatgcggcttgaaacaattggattggct
gaagggtatacgattgcagattatgagcagcggcttgattatgaaatttcagttattacg
cgtatgcaattttctggatattttcttatcgtttcagatttcataaaatgggcaaaggtt
catgatatccccgttggaccaggacggggttctggtgctggttcacttgttgcttatgca
ttgacgattactgatgttgatccattgcggttttctcttctcttcgaacgttttctcaac
ccagatcgtgtttcgatgccagattttgatatcgacttttgtcaagagcggcgcgaagaa
gttattcaatatgttcaaaaaaaatatggacgtaatcaagttgctcaaattattaccttt
ggtaagttacaggcacgtgcagttttgcgtgatgtggggcgtgttttagaagttccttat
cgtcaggtggattatcttacaaaattaattcctgccacaccaggaagtcaggtagaattg
gctgatgctattaaggatgaacctaaatttgaagaggaaaagaaaaaagatcccgttgtt
ggacgcgcattagatatcgcactccagttggagggactttatcgtcatgcttcgactcat
gctgctgggattgttatcggagatcgtccgctttgggagcttgtcccgatgtatcgtgat
cctcgttctgatatgcctgttacacaatttaacatgaaatatgttgaacaggcagggctg
gtaaaatttgattttcttggattaaaaacgcttactgttttgaaaatggcagtcgatttt
gttgccagaaaggggataaaaatagatttatcaaatatccctctgaatgatgaaacaacc
tacgccatgatggcacgtggtgaaacggttggtgtgtttcaggtggaaagttctggtatg
cgcaaggcgttgattggaatgaagccagaccgtattgaagatattattgcgctggtcgca
ctttatcgtccaggtccaatggagaatattccaacctataatgcacgcaaacatggggaa
gaggaaattgcttctattcatcctaaaatcgatcatctgatcaaagaaacacaaggtgtt
attgtctatcaagaacaggtgatgcagattgctcaggtgcttgctggctattcgcttgga
gaagccgatttattacgtcgtgctatggggaaaaaaattcatgctgaaatgcaaaaacag
cgtacgcgttttgtcaatggagctgttgcaggtggtgttgataaagatcaagctgatatt
atctttgatcttttagcaaaatttgctgattatggttttaataaatcgcacgctgctgct
tatgcaattgtttcttaccaaacagcttatatgaaagcaaattatcccgttgagttttta
gcagcttcaatgacatatgatatgacgaatacagataaacttaatgattttcggcgtgaa
gcattaaggctgggtattgaagttattgcaccttctatacaaacatctcatcgtgttttt
gaggttggtgataactgtatttattattctcttgctgccattaaaggagtgggagaaact
gttgtggatcatattgttgcttgtcgtggggataagatttttaaggatctggaagatttt
tgtgcgcgtgttgatcctcgtattgttaataagcgtgcgatggaaagtttagtttgtgct
ggtgcttttgattgcttcaacattgcacgtgaggttttattagctaatcttggaaccctt
catgcgcgtgcacttcgtattctcgatgacaattctagcgggcaggttgatatatttgga
atggcaggcggattaaaagaaccattgatcttatcgcaaacaacctcttggttgccggct
gagaaactttatcgagaatttcaagctataggtttttacttttctgcgcatccattggag
gagtatcaagctattctagacaaaaaacgcattcagacttgggttaattttgccaatgcc
gttaaaggaggagcaacggctgcacggcttgctggaactgttgtggcaaaaaacgtgcgc
aaaacaaaatctggtaaaaaaatgggaattattcatttttctgatacaagtggacaatat
gaagctgttctcttttctgaggcactctcggattatgaagagatgctagaacccggaaaa
tcttttattattacggtgagcgcagaaaatcgttctgaaggagttagtttgcgaattgaa
acaattcagtcgttggaacaggaatcattaaaacagcataaaatgatgcgtctttttata
aaaacagttgatatgcttccacaaattgaacaaaatttaaatcttggggggaatggagag
gttgggcttattttaattcaagaggatggattgcgagaagtcgaaattgcgcttcctaag
cgatataaggtaaattcacatgtcgcaaatgctatgaaattaattcagggtgttgttgat
gtagaattgagttaa
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