Bartonella grahamii: Bgr_12390
Help
Entry
Bgr_12390 CDS
T00922
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
bgr
Bartonella grahamii
Pathway
bgr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bgr_12390 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgr03400
]
Bgr_12390 (uvrA)
DNA repair and recombination proteins [BR:
bgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bgr_12390 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bgr_12390 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_25
AAA_21
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND1
AAA_23
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACS51478
UniProt:
C6AE73
LinkDB
All DBs
Position
1395620..1398535
Genome browser
AA seq
971 aa
AA seq
DB search
MTYQKYISIRGAREHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEVMQKPDVDRIDGLSPAISIEQKTTSRNPRSTVGTVTEIHDYMRLLFARIGI
PHSPVTGLPIESQTVSQMVDQIMSLPEGTRIFIMAPLVRGRKGEYKKELTELLKRGFQRA
KVDGKFYEIADIPPLDKKYKHDIDVVVDRIVVQKDITSRLADSIETCLQLANGLAIAEMA
DQPLAQKETTKESAHKSKNNTHKRLIFSEKFSCPVSGFSIPEIEPRLFSFNNPFGACPLC
DGLGIKKAMDPLKIVPNKNLTLKNGAIAPWAKSDSLYYSQTLEALGKAYGFKLTDQWCEL
SNEAQQAILYGTKKDEISFIYKNNSGSHKTTQPFEGIIPNMERRWKETDSAWSREEIERY
MSSSPCPACHGYRLKPEALAVKIHGMHIGQISDLSILKADDWFANIHQYLTEKQRNIAIR
ILKEIRERLAFLNHVGLEYLTLSRNSGTLSGGESQRIRLASQIGSGLTGVLYILDEPSIG
LHQRDNERLLEMLRHLRNLGNTVIVVEHDEDAILTADYVVDMGPAAGVHGGEIIAQGTPQ
EIIENSASLTGQYLSGKMAVKIPAVRRKISKMKTLKIIGAKGNNLKNINANIPLGTFTCV
TGVSGGGKSTFLIETLFKAASHHIMGSHHSPASYDKIEGLEFLDKVIDINQSPIGRTPRS
NPATYTGAFTPIREWFADLPESKARGYKAGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCKGKRYNRETLEIKFKGQSIADILDMTIEKAEEFFQAIPAIHNKMETLIKVGLG
YIKVGQQATTLSGGEAQRVKLAKELSRKTTGRTLYILDEPTTGLHFHDISKLLEVLHELV
EQGNTVIVIEHNLDVIKTADWIIDLGPEGGDRGGEIVAIGRPEDIIKVPASYTGKFLKDV
LLRPSLYNSNS
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcaaaaatatatctccattcgcggtgcacgtgagcataaccttaaaaatatt
gatctcgatctgcctcgtgacaaacttattgttataacaggactttccggatcaggaaaa
tcatccttagcttttgatacaatttacgctgaaggacaacgccgctatgtcgaaagcctt
tcagcctatgcacgccaatttttggaagtcatgcaaaaacccgatgtcgaccgcatagac
ggtctctctccagctatctccattgaacaaaaaacaaccagtcgcaatcctcgttcaacg
gtaggtaccgttactgaaatccacgattacatgcgtcttctctttgcacgtattggtatt
cctcattctcctgtgacaggacttcctattgaaagccagacagtaagccaaatggtggat
caaattatgtccttaccagaaggaacacgaatttttattatggcccctttggtgcgagga
cgaaagggagaatataaaaaagagctaacagaacttttaaaaagaggatttcaacgcgct
aaagttgatggaaaattctatgaaatcgctgatattccacctcttgataaaaaatataaa
cacgacatcgatgtcgtggtagaccgcattgttgtacagaaggatatcacctctcgcttg
gctgatagtatagaaacctgtttacagctagcaaatgggcttgccattgctgaaatggca
gaccaacccttagcacaaaaagaaacgacaaaggaatctgctcataagtcgaaaaataat
acacacaaacggctcattttttcagaaaagttttcctgccctgtatcgggtttttctatt
cctgaaattgaaccacgccttttttcgttcaataatccttttggcgcctgtcctctctgc
gatggactgggcatcaaaaaagcaatggatccactgaaaattgtgcccaataaaaatctt
accctcaaaaatggcgccattgctccttgggctaaatcggattcactttattatagccaa
accctagaagcattaggaaaagcttacggtttcaaactcacagatcaatggtgtgaactc
tctaatgaagcacaacaggctattctctacggtacaaaaaaagatgaaatttcttttatc
tataaaaataattctggttcgcataaaacgacccaaccttttgaaggaatcatccccaat
atggagagacgctggaaagaaaccgattctgcttggtctcgagaagaaatcgaacgttat
atgtcttcttcgccttgcccagcttgtcatggttatcgtttaaaaccagaggcacttgct
gtaaaaatccacggaatgcatattgggcaaatatcagatctttctattctaaaggcagat
gattggtttgccaatattcatcaatatctcacagaaaaacaacgtaatatcgccatacgt
attttaaaagaaattcgcgaacgcttagcttttttaaatcatgtaggattggaatatctt
accttgtctcgaaattcaggaacgctttcaggtggagaaagccaacgcattcggttagca
tcccaaattggttctggtcttacaggcgttctttatattttagatgaaccatctatcggt
ttacaccaacgcgataatgaacgccttttggaaatgctgcgtcatttacgcaatcttggc
aatacagttattgttgttgaacatgatgaagatgctattctcacagcagattatgttgtc
gatatgggccctgccgcgggcgttcatggtggagaaatcatagcgcaagggacaccacag
gaaattatagaaaattcagcctctctcacagggcaatacctttcaggaaaaatggctgtt
aaaatacccgccgtgcgacgcaaaatatcaaaaatgaaaacacttaaaatcatcggcgcc
aagggaaataacctcaaaaatatcaatgcgaacatccctcttggaaccttcacatgtgta
accggtgtttctggaggaggaaagtcaacatttcttattgaaacgcttttcaaagcagct
tcacatcatatcatgggctctcatcacagccctgccagctatgacaaaattgaaggatta
gaatttcttgataaagtcattgatatcaaccagtcccccattggacgcaccccacgctct
aatcccgcaacctatacaggcgcttttacaccgattcgtgagtggtttgctgatcttcca
gaatcaaaagcccgtggttataaagctgggcgtttttcatttaatgttaaaggaggacgt
tgcgaagcatgtcaaggtgatggagtcataaaaattgaaatgcactttttacccgatgtc
tatgttacttgcgatgtctgtaaaggaaaacgctataatcgagaaacactagaaataaaa
ttcaaaggacagtctatagccgatattttggatatgacaattgaaaaggcagaggaattt
ttccaagctattcccgctattcataataaaatggaaactctcattaaagtaggattaggt
tacataaaagtaggacagcaagcaaccacactttctggtggagaagcacaacgtgtgaaa
cttgcgaaagaactttcacgtaaaacaacgggacgtacactctatattttggatgaacca
acaacaggtttacattttcacgatatttccaaacttcttgaagtgctgcatgaactagtc
gagcaaggcaacacagttatagtcattgaacataaccttgatgttataaagacagccgac
tggattattgatttaggaccagaaggtggagatcgtggtggtgaaattgttgcaattgga
cgccctgaggacatcattaaggttcccgcttcctacacgggaaaatttctaaaagatgtt
ttactgcgcccctctctctataattctaattcttaa
DBGET
integrated database retrieval system
