Bartonella grahamii: Bgr_13450
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Entry
Bgr_13450 CDS
T00922
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgr
Bartonella grahamii
Pathway
bgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bgr_13450 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgr03019
]
Bgr_13450 (rhlE)
Enzymes [BR:
bgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bgr_13450 (rhlE)
Messenger RNA biogenesis [BR:
bgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bgr_13450 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACS51562
UniProt:
C6AEF7
LinkDB
All DBs
Position
complement(1503372..1504754)
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AA seq
460 aa
AA seq
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MPINEENVFTKLGLPTLLIKNLLIAGMSKPKPIQEQAIPVMLKGHDILGVAQTGSGKTLA
FGLPILSQILALGDKRCPKTARALILAPTRELAVQIDETIRTAAKGAHLSTCLIFGGVSR
LKQIKRMEAGVDVLIATPGRLKDLVREKCVDLSQSRFLILDEADRMLDMGFIHDVKQIAK
LLHQERQTALFSATMPREIAVLAKCLLNDPVKIEVVPQGTTAVEICQKLYCVPTNEKKNV
LSKLLTNPAFNSVIVFTRTKHGADSVTRSLAKIGYSVATIHGNKSQGARQSALKAFRERS
VQILVATDIAARGIDIPGISHVINYDLPDEAESYVHRIGRTGRNGASGEALTLFDEKIER
ERLRAIERLIRMKLAVESVPEQFAAFPEKPILPESREKENDKERRFKKSKRQKQFLGRKD
DAAQLQRKNSSSPNERHKKAKAVAKRAKPFRFRKSVKKAA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgcctataaacgaagaaaatgtttttacaaagttaggtttgcctactcttttgattaaa
aatttactcattgctgggatgagtaaacctaaacctatacaagaacaagctattccagta
atgttgaaaggacacgatattttaggtgttgctcagacaggttctggaaaaaccttggca
tttggtttacctattttaagtcagattttggctttgggtgataaacgctgtcctaaaact
gcacgcgctttgattttagctccaacgcgtgaacttgctgtccagattgatgaaacgatt
cgcactgcggcgaagggagctcatctttcaacgtgtcttatttttgggggcgtgtcacgt
ttaaaacaaattaaacgtatggaagcaggtgtggatgttttgatagcgactccagggcgt
ttgaaagatcttgttcgtgaaaagtgtgttgatctttcccaatctcgttttttgattttg
gatgaagcagatcgtatgttggatatggggtttattcatgatgtcaagcaaattgcaaag
cttttgcatcaagagcgtcagacagcactcttttctgcaacaatgccgagggaaattgct
gtgcttgcaaaatgtctactcaatgatcctgttaaaattgaagttgttcctcaaggtact
acggctgtagagatttgccaaaaattatattgtgttcctacgaatgaaaaaaagaatgtt
ttaagtaaacttttgacaaatccagcttttaattcggttattgtttttacccgaactaaa
catggggctgattctgttacacgtagtttggcaaagataggatattcagtcgcaacgatt
catgggaataaatcacaaggtgctcgccagtctgctttaaaagcttttcgtgaaagatct
gtgcagatccttgtggcaacagatattgctgcacgcggtattgatataccagggataagc
cacgttattaattatgacttaccagatgaagctgaaagttatgtacatcgtattggtcgt
acaggacgtaatggtgcatctggtgaagcacttacactttttgatgagaagatagaaagg
gaacggttgcgtgctatagagcgcttgattcgtatgaaattggcggttgagtcagttcca
gaacaatttgcagcgtttccagaaaagccaattttgccagaaagtagagaaaaagaaaac
gataaggaacgccgttttaaaaaatctaaacgtcaaaaacagtttttaggtcgaaaagat
gatgccgcacagttgcagcggaagaattcttcatctccaaatgagaggcataaaaaagca
aaagcggtggcaaagcgtgcaaagccttttcgttttcgaaaatcagttaagaaggctgcc
tag
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