Bartonella grahamii: Bgr_13820
Help
Entry
Bgr_13820 CDS
T00922
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgr
Bartonella grahamii
Pathway
bgr03420
Nucleotide excision repair
bgr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bgr_13820 (uvrD)
03430 Mismatch repair
Bgr_13820 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgr03400
]
Bgr_13820 (uvrD)
Enzymes [BR:
bgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bgr_13820 (uvrD)
DNA repair and recombination proteins [BR:
bgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bgr_13820 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Bgr_13820 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
DUF3553
Tudor_1_RapA
DUF4420
IQCJ-SCHIP1
Motif
Other DBs
NCBI-ProteinID:
ACS51588
UniProt:
C6AEI3
LinkDB
All DBs
Position
1543914..1546253
Genome browser
AA seq
779 aa
AA seq
DB search
MSNFSDHNIPFFEEDSPPDHDKRSSGFSSHTLKEQKSYNTDYLKQLNPEQQQAVMNTEGP
LLVLAGAGTGKTRVLTTRISHILRSGLASPQQILAVTFTNKAAREMKTRIGELIGGVVEG
MPWLGTFHSTGAKILRRHAELVGLKRNFTILDSDDVLRLLKQLIQAEGLDDKRWPARNLA
MMIDSWKNQGLSPEHISKSDAHSFGNGMGRELYHSYQNRLKDLNACDFGDLLLHSISIFQ
HNPDILREYHSQFRYILVDEYQDTNTAQYLWLRLLAQHPQGQHVNLCCVGDDDQSIYGWR
GAKVENILRFEKDFPSAKIIRLERNYRSTSHILKTASHLIAHNEERLGKVLFSAQIKSEE
EKVKIHSAWDSQEEARAIGEEIEQAHQTGHALNHMAILVRASFQMREFEDRFVTLGLNYR
VIGGPRFYERMEIRDAMAYLRVVVQPADDLAFERVINTPKRGIGDATLRILYESARARAV
PLFSAAADIIETDELKPKARSALRSLIENFRRWQNMLQDTPHKELAEIILDDSGYTTMWL
EDRSPEAPTRLENLKEMIRSMEQFENLQSFLEHVALVMDAENNENTDAVNIMTLHSAKGL
EFETVFLPGWEEGLFPHQRSLDEGGRSGLEEERRLAYVGLTRAKKHLHIWFVSNRRIHGL
WQSTLPSRFLDELPAEHIEAIAMETSYGGYGKSSFQNHDSCYTGYATARQKHAQKNKTIE
GKIIAQSISHASSDFSINDRIFHIKFGYGHITAIDDHKLTIMFEKAGEKRVLDNFVNKA
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatttttctgatcacaacatacctttctttgaagaagattcccctccagaccat
gataaaaggagctctggtttttcctcccatactctaaaagaacaaaaatcatataacaca
gactatttaaaacaactcaatccagaacagcaacaagctgttatgaatactgagggacct
cttttagttcttgcaggtgctggtacaggaaaaacgcgcgttttaacaacccgtatttct
catattttacgctctgggcttgcctctcctcaacaaatacttgctgttactttcaccaac
aaagcagcacgtgaaatgaaaacacgtattggtgaacttattggaggagttgttgaaggt
atgccttggcttggaacttttcactccactggtgctaaaattttacgccgtcacgcagag
cttgttggtttaaaaagaaactttacaattctcgatagcgatgatgttcttcgactttta
aaacagcttattcaagctgagggactagacgataagcgttggcccgcacgaaaccttgcc
atgatgattgattcttggaaaaatcaaggactttcaccagaacatatctcaaaaagtgat
gctcattcctttggcaacggcatgggacgcgaactttatcacagttatcaaaatcgatta
aaagatcttaatgcttgtgattttggtgatcttctgcttcattctatctctatcttccaa
cataatccagatattcttcgcgaataccattctcaatttcgctatattcttgtcgatgaa
taccaagatacaaatacagcacaatatctttggcttcgccttttggcacaacatccccaa
ggtcaacatgttaatctttgttgtgttggcgatgatgatcaatccatttatggatggcgt
ggtgcaaaagtcgagaatatattacgttttgaaaaagattttccttctgccaaaattatt
cgtctagaacgtaattatcgctcaacatcccatattcttaaaaccgcctcccatctcatt
gctcataatgaagaaagactgggcaaagtccttttttctgcacaaataaagagtgaggaa
gaaaaagtaaaaattcattcagcatgggattcgcaagaagaggcccgtgccatcggagaa
gaaattgaacaagcacaccaaacaggtcatgcattaaatcatatggctatattggtgcgt
gcatcattccaaatgcgtgaatttgaagatcgctttgtaacgcttggtcttaactaccgc
gtcattggtggtcctcgtttttatgaacgaatggaaatacgtgatgctatggcttattta
cgcgttgttgtccaacctgctgatgatttagcttttgagcgtgttattaatacaccgaaa
cgcggcataggcgatgcaaccctgcgcattctttatgagagtgcgcgagcacgtgctgtt
cctctcttttctgcagccgctgacatcattgaaacagatgagttaaagcctaaggcacgc
agtgcgttacgaagccttattgaaaacttccgccgctggcaaaatatgcttcaagatact
cctcataaagaacttgccgagattatccttgatgattctggttatacaaccatgtggtta
gaagatcgctcaccagaggctcctacacgactagaaaatcttaaagaaatgatccgttcc
atggaacaatttgaaaatcttcaaagttttttggaacatgttgcactcgttatggatgct
gaaaacaatgaaaataccgatgcagtcaacatcatgacacttcattcagccaaaggactt
gaatttgaaacagtttttcttcctggctgggaagaaggactttttccccatcagcgctca
ttagatgaaggtggacgttcaggattagaagaagaacggcgtcttgcttatgttggactc
acaagagcaaaaaaacacctgcatatatggtttgtatctaatcgtagaattcatggactt
tggcaatctactcttccctcccgctttctagatgaattaccagcagaacatatagaagcc
atagcaatggaaacatcttatggtggttatggaaaatcttcctttcaaaatcacgattcc
tgttatactggctatgcaacagcaagacaaaagcatgcacaaaaaaacaagacgattgaa
gggaaaattatcgctcaatcaatctctcatgcatcatcagatttttccatcaatgatcgg
atttttcacataaaatttggttatggtcatattacagcaatagacgatcataaattgaca
ataatgtttgaaaaagccggagaaaagcgtgtactggataattttgtcaacaaagcttaa
DBGET
integrated database retrieval system
