Borreliella garinii SZ: X921_00040
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Entry
X921_00040 CDS
T03259
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bgs
Borreliella garinii SZ
Pathway
bgs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X921_00040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgs03400
]
X921_00040
DNA repair and recombination proteins [BR:
bgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X921_00040
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
X921_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
RsgA_GTPase
nSTAND3
nSTAND1
AAA_23
AAA_22
AAA_25
NACHT
AAA_15
AAA_33
SLFN-g3_helicase
cobW
Viral_helicase1
T2SSE
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AHZ73731
LinkDB
All DBs
Position
complement(10187..13039)
Genome browser
AA seq
950 aa
AA seq
DB search
MIKNLEKKIIVRGAKEHNLKNIDIDIPKDGLVVISGKSGSGKSSLAFDTIFAEGQRRYME
SVSAYARQFLGVMKKPNVDYIDGLSPSIAIEQRAIGNNPRSTVGTITEIYDYYRLIFAKI
GKAYCPNDGRLIEEQSLDKIVNTILSYAEGSKVILFAPIVRGSKGSHKKVLEKILNQGFN
RVRINSEDYLIEDALNLNLHKNKKHTIEIIVDRIKLGNNVRVRLAESIETSLAVSNGYLR
VEIENDLEKIDKFFTEHNSCPLCGFSLPFIEPRLFSFNSPFGACSECSGLGVTLEFDFES
ICPDTSLSFNDDAFITFKTSSSWSVAIFKGLAKHYNFELNTPVKDIPSKVLKQILYGANE
KIDFIYQSKEMEAREMDGGFHYSKKFEGLLPLLKRRYLTTESESTKIFYENLMSKKICNS
CKGKRLCTGALAVKINGRDIQDLSNLSVFDSYMFFENLQLDAVDEKISKEILKEIKSRLK
FLIDVGLSYLYLNRISGSLSGGEAQRIRLATQIGSALSGVIYVLDEPSIGLHQRDNEKLI
STLVNLKNLGNTVIVVEHDEQTLRTADYIIDMGPGAGILGGEIVAKGALIDILNSKNSLT
GQYLSGKFKIDVPSSRRKTDKGEILLLGSNKNNLKNIDVSIPLGVFTVITGVSGSGKSTL
LNEVLYPALDSRLKLDEKYCDGFKDIIGYEKIDKIIQINQKPIGRTSRSNPATYVGFFTE
IRELFAKLPDAKSRGFKAGRFSFNVKGGRCEKCQGDGYLNIQMHFLPDVFIPCDLCKGKK
FNEETLEVRYKGKNIHDVLEMSVFEAKNFFENVPKVSHYLKFLIEVGLEYIKLGQSATTL
SGGEAQRIKLAFELSKKSTGKTFYIVDEPTTGLHFDDIKKLLEVLQRLVSNGNTVVLIEH
NLDVIKQADYIIDLGPDGGLAGGNIVVSGVPEEVAKCENSYTGMFLKNLL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
ttgataaaaaatttggaaaaaaaaattatcgtcaggggagcaaaagaacataatttaaaa
aatattgatatagatattccaaaagatggtttagttgtaatatctggcaagagcggctct
ggtaaatcttctctagcttttgatactatttttgcagaagggcaaagaaggtatatggag
tctgtttcagcttatgcaaggcaatttttgggtgtaatgaaaaaacccaatgttgattat
atagatggactttctccttctatagctattgagcagagagcaataggcaataatcctcgc
tctactgttggaacaattactgaaatttatgattattatagactaatatttgctaaaata
ggtaaagcatactgtccaaatgatggtagattaatagaagagcaatctttagataaaata
gttaatactattttaagttatgccgaaggatctaaagttatactttttgcaccaattgta
aggggctctaaaggttctcataaaaaggttttagaaaaaatattaaatcaagggttcaat
agagtcagaataaattctgaagattatttaatagaagatgcacttaatttaaatttacat
aaaaataaaaaacataccattgaaattatagttgatagaatcaagcttggtaataatgtt
cgagttagacttgcagaatctattgaaacctctcttgctgtttctaatgggtatttacga
gtggagattgagaatgatttagaaaaaatagataagttttttacagagcataatagttgt
cctttatgtggattttcgcttccttttatagagcccaggcttttttcatttaatagtcca
tttggtgcttgcagtgagtgctctggtcttggtgttacacttgagtttgattttgagagt
atttgtcctgatacaagtctttcttttaatgatgatgcttttattacttttaagacaagc
tcatcttggtctgtggctatttttaaaggacttgctaagcattataattttgaattaaat
acccctgtaaaagacattccaagcaaagttcttaaacagattttatacggagcaaatgaa
aaaatagattttatttatcagtccaaagaaatggaagcaagggagatggatggaggattt
cattattccaaaaagtttgaagggcttttacctcttttaaaaagacgatatcttacaaca
gaatcagagagtactaaaattttttacgaaaatttgatgtctaaaaaaatctgtaattca
tgtaaggggaagcggttatgcactggagctttagctgtgaaaatcaatgggagagatatt
caagatcttagcaatttatctgtatttgattcttatatgttttttgaaaacttacagctt
gatgcggtggatgaaaaaatatctaaagaaattttaaaggaaattaaaagtaggcttaaa
tttttaattgatgttggtctttcttatttgtatttaaatagaatatcgggcagtctatct
gggggtgaggctcagcgtattaggcttgctactcaaataggatcagcactttcaggcgtt
atttatgttcttgatgagccaagtattggtcttcatcaaagagataacgaaaaattaatc
tctactcttgttaatcttaaaaatcttggcaatactgtaattgttgttgagcacgacgag
caaactttgcgtactgcagactatattattgatatgggtcctggtgccggaattcttgga
ggagaaatagttgcaaagggagccttaattgatattttaaatagcaaaaacagtttaact
ggtcagtatttgagcggcaagtttaaaatagatgttccaagctctagaagaaaaacagat
aagggagaaattttgcttttaggctctaataaaaacaatcttaaaaatatagatgtaagt
atccctttgggagttttcactgtaataacaggtgtttctggtagtggaaaaagtactttg
cttaacgaagtgttatatccagctcttgatagcagattaaagcttgatgaaaagtattgt
gatgggtttaaagacattattggatacgaaaaaatagataaaattattcaaataaatcaa
aaaccaataggaagaacttcaagatcaaacccagcaacttatgttggattttttacagaa
attagggagctttttgctaagcttccagatgcaaaatcaagaggttttaaagccggtaga
ttttcttttaatgttaaaggcggaagatgtgagaaatgccaaggagatgggtatctcaac
attcaaatgcattttttaccagatgtttttattccttgtgatttatgcaagggtaaaaaa
tttaatgaagaaactttagaggttaggtataaaggaaaaaatatacatgatgttttagag
atgagtgtatttgaagctaaaaatttttttgagaatgttcccaaagttagtcattatttg
aaatttttaattgaagttgggcttgaatacatcaaattgggacaatctgcaacaacttta
tcaggaggcgaagctcaacgtattaagttggcttttgagctaagtaagaagagcacaggt
aaaaccttttacatcgtcgatgaaccaacaaccggattgcattttgatgacataaagaag
ttgttagaagttttgcagcggttagtttctaatggtaatacagttgtactcatagagcat
aatttagatgtaattaagcaagcagattatataatagatttgggtcccgatggtggattg
gcaggggggaatatcgttgtttctggtgttcccgaagaggttgcaaaatgcgagaattcc
tatacgggaatgtttttaaaaaatcttttgtaa
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