Borreliella garinii SZ: X921_00045
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Entry
X921_00045 CDS
T03259
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bgs
Borreliella garinii SZ
Pathway
bgs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X921_00045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgs03400
]
X921_00045
DNA repair and recombination proteins [BR:
bgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X921_00045
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
X921_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
UvrB
UvrB_inter
ResIII
UVR
DEAD
Viral_helicase1
AAA_30
DUF87
Motif
Other DBs
NCBI-ProteinID:
AHZ73732
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Position
complement(13056..15056)
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AA seq
666 aa
AA seq
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MIDFFLNSEYLPAGDQPKAIKEIENSILLGNKYQTLKGVTGSGKTFTIANIIKDLNRPAL
VVSHNKTLAAQLYREFKDFFPNNAVEYFVSYYDYYQPESYVPSKDLFIEKEATINTEIEI
KRIRTVTSLAKRRDVIVVATVSSIYALGSPDFFKKSAREFFVGQKISIKEISDIFVELYY
ERTLMNLERDKFSIKGNIIEIWPSSEHGEFAYRICLDFDEIVEIYRISSFSKKNLGTTNS
FTLFAKSYFVIPYKNVLEAIPKISYDLNLQCQYFKDNGKLVEAERLKQRVEYDLEMLRET
GFCSGIENYSKYLSGSEMKRPYCLFDFFPKDYLLFVDESHVTLPQFRGMYNGDYSRKLNL
VNFGFRLPAALENRPLKYDEFDALINQVVFVSATPGLEENLKSSVVVDQIIRPTGLVDPE
IITRHSDGQMEDLYSEIQKRVALKERVLITTLTKKMSEDLTEYLVSLGVRAKYLHSELDT
LERVEVISLLRKSEIDVIVGINLLREGLDIPEVSLVAILDADKVGFLRSTTSLIQTIGRA
ARNSNGLVIMYYDTISVAMREAIEETNRRRQIQVDYNKKNNITPKTIVKKIQNILEKELN
NKNKNKNINYDLEKIISGERLSKKKLINKLKFELEEAVNDERFEDAIVLRDKIKELSSKI
SVARNK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgatagatttttttttgaattcagaatatcttcctgctggtgatcaacctaaagcaata
aaagagattgaaaattctattttgcttgggaataagtatcaaacattaaaaggtgttaca
ggaagtggaaagacttttacaattgcaaatataattaaagatctaaacaggcctgctttg
gttgtcagtcataataaaacattagcagctcaactttatagggaatttaaagattttttc
ccaaacaatgctgttgaatattttgtttcttattatgattattatcagccagaatcctat
gtgccttcaaaagatttatttattgaaaaagaagctactattaatactgagatagaaatc
aagcgaataaggactgtaacttcccttgctaaaaggcgagatgtcattgttgttgcaact
gtatcttcaatttatgctcttggatctccagattttttcaaaaaatcagcacgagaattt
tttgtaggtcaaaaaatctctattaaagaaatatcagatatttttgtagaactttattat
gagagaactttaatgaatctagagagagataaattttcaattaaaggaaatattattgaa
atttggcctagcagtgagcacggagagtttgcttatcgaatttgtttggattttgatgaa
attgttgaaatatataggattagttcattttctaaaaaaaatttaggaaccacaaatagt
tttactctttttgctaaatcttattttgtaattccttataaaaacgtattagaagcgata
cctaaaatatcttatgatttaaatcttcaatgtcaatattttaaagataatggcaagctt
gtagaagccgagaggcttaagcagagagtagagtatgatttggaaatgcttagagagaca
ggattttgttcgggcattgaaaattattctaaatatttgagtggaagtgaaatgaaaaga
ccttattgtctttttgattttttcccgaaagattacttattgtttgtagacgaatctcat
gttacattgccgcaatttaggggaatgtataatggagattattctagaaaattaaatctt
gttaactttggattcagacttcctgcagcgcttgaaaataggcctcttaaatatgatgaa
tttgacgcattaattaatcaggttgtgtttgtatctgcaactccaggtcttgaagagaat
ttgaagagtagcgtggttgtcgatcaaataattcgtcctacaggtcttgttgatccagag
attattaccaggcattctgatggtcaaatggaagatctttatagcgagattcaaaaaaga
gtagctcttaaagaacgggttttaattactactttgacaaagaaaatgtctgaagatttg
actgaatatttggtaagtcttggagtaagggcaaaatatttacattcagaacttgacact
cttgaaagagtagaggttatttcgttgcttagaaaatctgaaattgatgttattgttggc
attaacttacttagagagggcttagatatcccagaagtatctcttgttgcaatattagat
gctgataaagtagggtttttaagatctactacttcattaatacaaacaattggcagggct
gctagaaattctaacggacttgtaataatgtattacgacacaataagtgtagctatgcgg
gaggcaattgaggaaactaatagaagacgtcaaattcaggttgattataataaaaaaaat
aatattactcctaagacaattgttaagaaaattcaaaatattttagaaaaagaacttaat
aataaaaataaaaataaaaatattaactatgaccttgaaaaaattatttcaggcgagaga
ttgtctaaaaaaaagcttattaataagcttaaatttgagctagaagaggctgttaatgat
gaaaggtttgaagatgcaattgttttaagagataaaataaaagagcttagtagcaaaatt
agtgtggctcgtaataaataa
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