Borreliella garinii SZ: X921_00200
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Entry
X921_00200 CDS
T03259
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bgs
Borreliella garinii SZ
Pathway
bgs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X921_00200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgs03019
]
X921_00200
03016 Transfer RNA biogenesis [BR:
bgs03016
]
X921_00200
Enzymes [BR:
bgs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
X921_00200
Messenger RNA biogenesis [BR:
bgs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
X921_00200
Transfer RNA biogenesis [BR:
bgs03016
]
Prokaryotic type
tRNA degradation factors
X921_00200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AHZ73761
LinkDB
All DBs
Position
complement(52372..54537)
Genome browser
AA seq
721 aa
AA seq
DB search
MRKILKLKIGRDELVFETGFMAKQANGSVLATYGGSSVLATVCCSNNVREDLDFVPLSVE
YNEKYYAAGKIPGGFIKREGKPKDKEILVSRLIDRPMRPLFDKRFGREIQVIPTTLATDQ
LNPPDIVGMNAAFTAVFLSDIPFNGPIAAVRMVYLNGKFIVNPSFEEIHDSDLDIVVAGS
LNGITMVEGGANEVSEDILLSAIDGAHEYIKQICNAQKEFLDIVGEKEKLPLAFEEKIFE
FKEELKDFIYTDLKEACFVKGKLNRDKAITVLRNKSYEHFSSLEKLTDSNESLFYKAFDD
FEREIVRNSILNDKIRTDGRTPNEIRDIIAEVDILSRTHGSALFTRGETQALAVTTLGTS
IDEQIMDDIDGDKRLNFMLHYNFPPFSVGETGRLMTGRREIGHGHLAQRALESMVPGKND
FPYTIRVVSEILESNGSSSMATVCAGSMSLMSAGVPVKRQVAGIAMGLISEGDKYVVLSD
ILGEEDHLGDMDFKVAGTKNGITGFQMDIKIENVTKHLMRDALEQARIGRMHILSVMDTV
ISDSRVGISKYAPKIVQLQIDIDKISLVIGSTGKTVKAITDEFEVKVQIEQNGKIILFGD
DDFKMQKAKERIESIVREPKVGEIYEGIVKKINSFGAFIELTPTKEGFLSTRLKSRDNKY
GSGRFGTGNRYSRFGGGDNIRGNVGLVRPPKLEEGQQIKVKIIDIDKFGKIDLEVVRDKD
Y
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
ttgaggaaaatattaaagttgaaaataggtagagacgagttagtgtttgagacgggattt
atggctaaacaggctaatggatcagttcttgcaacttatggaggatcttcagttcttgcg
actgtttgttgttcaaacaatgttagagaagatttagattttgttccactttctgttgag
tataatgagaaatattatgcagccggcaagattccaggaggatttattaaaagagaagga
aagccaaaggataaagaaatacttgtttctaggttaatagatagaccaatgagacctctt
tttgataaaagatttggtcgagaaattcaagtaattcctacgaccttagctacagatcag
ctcaatcctcctgatattgttggaatgaatgctgcttttacggcagtttttttatcagat
attccgtttaatggtccaattgcagctgttaggatggtttatttaaatggtaagtttata
gtaaatccttcttttgaagagattcatgattccgatcttgatattgttgttgcgggaagt
ttaaatggaattacaatggtagaaggtggtgctaatgaggttagtgaggatattttactg
tcagcaatagacggtgcacatgaatatattaaacaaatttgcaatgctcaaaaagaattt
ttagatattgtaggggagaaggaaaaacttcctttagcttttgaagaaaaaatatttgaa
tttaaagaggagcttaaggattttatttatactgatcttaaagaggcctgttttgttaag
ggaaagcttaatagagataaggctataactgtactgcgaaataaatcttatgagcatttt
tcttctcttgagaaattgactgatagtaatgagtctcttttttataaagcttttgatgat
tttgagagagagattgttagaaattctattcttaacgataaaattagaacagatggtcga
actcctaatgagataagagatattattgcagaagttgatattttgagtagaacgcatgga
tctgcgctttttacaagaggagagacacaggctttagcagtaactactcttggcacaagc
attgatgagcaaataatggatgatattgatggcgacaagcgtcttaattttatgcttcat
tacaattttcccccattttcagttggtgagaccggtaggctcatgactggtaggcgtgag
attggtcatggtcatttagcccaaagagctttagaatcaatggttcctggaaaaaacgat
tttccgtatactattagggtagtttctgaaattttggagtctaacgggtcttcttcaatg
gctactgtttgtgctggaagcatgtctttaatgtctgcaggagttcctgttaaaagacaa
gttgcaggaatagccatggggcttattagtgaaggggataaatatgtagttttgagtgat
attcttggagaagaggatcatttaggtgatatggactttaaagtggctggtacaaaaaat
ggaatcactggatttcaaatggatattaaaattgaaaatgttactaagcatttaatgagg
gatgctcttgagcaggcaagaataggtaggatgcacatactttctgttatggatactgtc
atttcagattcaagagttggtatatctaagtatgctcccaaaattgttcaactgcaaatt
gatattgacaagatatctcttgtaataggatctactggaaaaactgttaaggctataaca
gatgaatttgaagttaaagttcaaattgagcaaaatggtaaaattattcttttcggtgat
gatgattttaagatgcaaaaggctaaagaaagaatagagagtattgtaagggaaccaaag
gtaggtgaaatttatgaaggaatcgttaaaaagattaatagctttggagcttttattgaa
cttactcctacaaaggaaggatttttaagtactcgcttgaaatctagagacaataagtat
ggttctggaagatttgggactggcaatagatattccagatttggtggtggagataatata
agaggtaatgtagggttggttcgtcctccaaaattagaagaaggtcagcaaattaaagtt
aaaataattgatatagataaatttggaaaaattgatcttgaagttgttagagataaagat
tattaa
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