Borreliella garinii SZ: X921_01080
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Entry
X921_01080 CDS
T03259
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bgs
Borreliella garinii SZ
Pathway
bgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X921_01080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgs03400
]
X921_01080
Enzymes [BR:
bgs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
X921_01080
DNA repair and recombination proteins [BR:
bgs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X921_01080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
Viral_helicase1
PIF1
UvrD_C_2
Helicase_RecD
AAA_22
SLFN-g3_helicase
T2SSE
RsgA_GTPase
AAA_5
SH3_13
NPHP3_N
AAA_16
RNA_helicase
AAA_24
DEAD
PSDC
AAA
AAA_28
Zeta_toxin
DUF3349
Motif
Other DBs
NCBI-ProteinID:
AHZ73928
LinkDB
All DBs
Position
238108..239940
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AA seq
610 aa
AA seq
DB search
MRDFLVLREFLKDKNKKFLIPELKLYEMIELLNINKKNYYKAQTLAKSINDENIVIFLIF
LFNYYDKGHLRANIKLLAKDIQNTITLTKDNLEKTNKSYNKSIKMLKGLEIFGNLENINN
IVSLLKKNNILMEFNKLKITTPLILENNIYIYTQKNYREEEELIKQIIKRLENHKSELND
NEIQNIISNLNTSNLNKEQITSVRKALKSNFFLLSGGPGTGKTTTINYILKAINQTLNNK
KKRLVAITAPTGKASLRLQTSIDYSFKNLEIECNTIQKLLGIKFINKKNLYDEENQLNFD
VIIIDEASMVDAYTFLKLLKATPITTKLIIVGDKNQLPSVNEGNVYSSLLGIKKINNDNV
EDLKENFRSNKEIYLLSKAIYKEDSTLICKYINDNKNIKLKEIEKINLKKDLIEYINNLY
RKISTFNLKLLKESKIETILETLLENIILSSKNFGKFGTKTLNEIIKNYLKKTYGNFIGQ
IIMITKTDYKNKLFNGERGIIFNENSKFYALFQRKNEKYKKINLDLLTNYEFSFATTIHK
SQGSEYKHIKVILENNPFLTKELMYTAITRAKDSLEIISNKETVLKLSKKSSKRDSKILE
HLNSFKEIDK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagagattttttagtattaagagaatttttaaaagataaaaacaaaaaattcttaatt
cctgagcttaagctttatgaaatgattgaacttttaaatatcaataaaaaaaattattat
aaagcacaaacacttgcaaagtccataaacgatgaaaatattgtaatatttttaatattt
ttatttaactactatgataaaggccacttaagagctaatataaagctattagcaaaagat
attcaaaatacaataacattaacaaaagacaacctggaaaaaaccaataaaagttataac
aaatcaataaaaatgctaaaaggattagaaatatttgggaatctagaaaatattaataat
atagtctcacttttaaaaaaaaataatatactaatggaatttaataaacttaaaattaca
actcccctaatcctagaaaacaatatctacatttatactcaaaaaaactatagagaagaa
gaagagttaataaaacaaattataaaaagattagaaaaccataaaagtgaattaaatgac
aacgaaatacaaaatataatatcaaatttaaacaccagtaatttaaataaagagcaaatt
acatcagtgagaaaagcattaaaaagcaacttctttttattgagcggaggccctggaaca
ggcaaaaccacaactattaactatatcttaaaagcaattaatcaaacattgaacaataaa
aaaaaaagattagtagcaattacagcacctacaggaaaagctagcttaagactacaaaca
agtattgactattcattcaaaaatttagaaatagaatgcaatacaatccaaaaactattg
ggaatcaaatttataaacaaaaaaaatctatatgatgaagaaaatcaactaaattttgat
gtaataataattgacgaagcttcaatggtagatgcatatacttttttaaagctattaaaa
gcaacaccaataactactaaattaataatagtaggagataaaaatcaactcccatcggta
aatgaaggaaatgtatattcaagtcttctaggaataaaaaaaataaataacgacaatgta
gaagatcttaaagaaaattttagaagcaacaaagaaatatacttgctctcaaaagccata
tacaaagaagatagtaccttgatttgcaaatacattaatgacaataaaaatattaaatta
aaagaaatagaaaaaataaacttaaaaaaagatctaatagaatatataaacaatttatat
agaaaaatatccacttttaatcttaaattactaaaagaatcaaaaattgaaacaatactt
gaaactttgcttgaaaatataattttaagttcaaagaattttggaaaatttggaactaaa
acactaaatgaaataataaaaaattacctaaaaaagacctatgggaactttattggtcaa
ataataatgataactaaaactgactataaaaataaattatttaatggagaacggggaatc
atttttaatgaaaattctaagttttatgccttatttcaaagaaaaaatgaaaaatataaa
aaaataaatttagatttactaacaaattatgaattcagctttgctacaacaatacacaaa
agccaaggatctgaatacaaacatataaaagtaatattagaaaataacccttttttgaca
aaagaacttatgtatactgcaataacaagggccaaagatagtttagaaataatttctaac
aaagagactgttcttaagctaagtaaaaaatctagcaaaagagattcaaaaatactagaa
cacttaaactcatttaaagaaattgacaaataa
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