Borreliella garinii SZ: X921_01240
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Entry
X921_01240 CDS
T03259
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgs
Borreliella garinii SZ
Pathway
bgs03420
Nucleotide excision repair
bgs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X921_01240
03430 Mismatch repair
X921_01240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgs03400
]
X921_01240
Enzymes [BR:
bgs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X921_01240
DNA repair and recombination proteins [BR:
bgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X921_01240
MMR (mismatch excision repair)
Other MMR factors
X921_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_12
UvrD_C_2
AAA_30
DEAD
ResIII
AAA_11
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AHZ73950
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All DBs
Position
complement(268647..270623)
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AA seq
658 aa
AA seq
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MPDDFFKNSLNQFQYKAVTTIEGALLIIAGAGSGKTRVVTHRIAYLLLKGIAQKEILALT
FTNKAANEMKDRIKKILKSSLSNLMVSTFHAFGLFFLKENYKLLGYKKNFSIYDDNDRIF
LLKEILLDEGLFNKKVSLSSLSNAISLLKNGILTLDDLKEEDINIFRLYEERLRLYNSFD
FDDLILKPKELLSNNSDIRSKYSKRYKYVLIDEFQDTSLLQYNFIRLLINHSNLCCVGDD
DQSIYSWRGASYNNMLQFEKDYSAKEIKLEQNYRSAKNILDVANSVILNNKNRKEKTLWS
SKMCSKVIDVFVFDDEIQESEFVASQIIELSRLEGFKSKKIGVLMRTNALFRNVEMIFKR
QGIKYKVSGGTSFFQRKEIKDIISYLNVIINPKSDYDLLRIINVPRRGIGKEYLKKIRDI
ADKKGCCIYDALCDIVFSFTSTSSYDKALNKQVIESIEDFVSFIEEYQYKFSITKNTYSN
IIKEMIESIEYWGFLVNENPNSIKVAEYKYQNIEGFLSIIKNWESKQFGELRDLSSFLNY
IVLQSNEVSEESENINVNLMTVHSAKGLEFDYVFFIAVEDNIIPHHRIIEESEIGLEEER
RVFYVALTRAKDSLIITMANKRKKDRQIFDQLPSRFISEIPKEFLNFNYYADFVENKA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgatgatttttttaaaaattctctcaatcaatttcaatataaagcggttaccact
attgagggtgctcttttaattattgctggtgctggcagtggaaaaacaagggttgttact
catagaatagcttatttacttctaaaaggcattgctcagaaggaaattttagccttaact
tttactaataaggcagctaatgaaatgaaagatagaattaaaaaaattttgaaaagttcc
cttagcaatcttatggtttcaacttttcatgcttttggacttttctttttaaaagaaaat
tataaattgttaggatataaaaaaaactttagcatttatgatgataatgatagaattttt
cttcttaaagagattttacttgatgaaggtctttttaataaaaaagtttctttaagttcg
cttagcaatgctatttcacttttaaaaaatggtattctaactcttgatgatttaaaggaa
gaagatataaatatttttagactttatgaagagcgattaaggctttataattcttttgat
tttgacgatttaattttaaagccaaaagaattgttaagtaataattctgacattagaagt
aaatattctaaaagatataagtatgttttgattgacgagtttcaagatacttctttgctt
caatataattttattcgccttttaataaatcatagtaatttatgttgcgttggggatgat
gatcaatcgatatattcttggcgtggggctagctataacaatatgttgcaatttgaaaaa
gattacagtgctaaagaaataaagcttgaacaaaattatcgttctgcaaaaaatatttta
gatgttgccaattctgtgattttaaataataaaaatcgaaaggaaaagaccttatggtct
tcaaagatgtgtagcaaagttatagatgtttttgtgtttgatgatgagattcaagaatct
gagtttgttgcaagtcaaataatagagctttcaaggctagaaggttttaaatctaaaaaa
ataggagttcttatgagaactaatgctctttttagaaacgttgagatgatttttaaaaga
cagggcataaaatataaggtttcagggggaacatcttttttccagagaaaagaaataaaa
gatattatttcttatttaaatgtaataataaatcctaaaagtgattatgatttgcttaga
atcataaatgttccaagaagaggaattggcaaggaatatttaaaaaaaattagagatata
gcagataagaaaggttgttgtatttatgatgctctttgtgatattgttttttcttttaca
agcacttctagttacgacaaagctttaaataaacaggtcattgaaagtatagaagatttt
gtgtcttttattgaagagtatcaatataaatttagtataacaaaaaacacttattctaat
ataatcaaagaaatgatagaaagtattgagtattggggatttctagttaatgaaaatccc
aattcaattaaagtggctgagtataaatatcaaaatatagaagggtttttaagtataatt
aaaaattgggaatccaagcaatttggcgaattgagggatttaagcagttttttaaactat
atagttcttcaatctaatgaagttagtgaggaatctgaaaatattaatgttaatttaatg
acagttcattctgctaaaggtttagaatttgattatgtattttttattgccgttgaagat
aatattattccgcatcatagaataattgaagagagcgagattggtttagaggaggaaagg
cgagttttttatgttgcattaactcgcgcaaaagattctcttattattactatggccaat
aagcggaaaaaagataggcaaatttttgatcagctgccttcaagatttatttcagaaatt
cctaaagaatttttaaattttaactattatgcagattttgttgaaaataaagcttga
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