Biomphalaria glabrata (bloodfluke planorb): 106052714
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Entry
106052714 CDS
T07368
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106052714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106052714
Enzymes [BR:
bgt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106052714
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106052714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
IPT
MRP-63
RRM_1
Motif
Other DBs
NCBI-GeneID:
106052714
NCBI-ProteinID:
XP_013063597
UniProt:
A0A2C9KWV0
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MPYRLKRETFISSAIENCDYLAIDGEFTGLDSGDGGHAAQFDTPAERYNKLRYGATDFLL
IQFGMCTFTAVEREHNLSSLIQVIFACSAVHCPLTAIDLCNLPESCVRISYLTPEQETKL
KAELDRKHDDIKKLSSPDSNNCNGSSVQIVPVPEDQKSFLNNICERITNYLEGEDAQPLI
IPPCNAFQRKLIYQTVIENIDFLIAQGFDFNKLFKEGISYLTPEQETKLKAELDRKHDDI
KKLSSPDSNNCNGSSVQIVPVPEDQKSFLNNICERITKYLEGEDAQPLIIPPCNAFQRKL
IYQTVIEKFPHVHLETKTGEKRERYMSVSKTKNADDRLKKEQEKQALEKMELDLEVGFSK
VIRAISKSGKLVVGHNMFLDVVHIINQFHSSLPEEHIKYSSLDELRQTLRGSPFTPAEVG
RARNSSNHFTLPCSSLVEPFINKLFLMRIADIPYLNLNGPDLEGSRDHVFHVTFPKEWKQ
SDLHSLFQPYGNIQISWLTDTTCYVALFKKEVAKIALKSLSQTSGPCHVVSYAFHHRNKN
LRWSAATPMPSPTVSIVKRKLVTTTTDSEAPPHKVKRHSFPTECPPIPEEDEITDHVSSS
LNEGSKST
NT seq
1825 nt
NT seq
+upstream
nt +downstream
nt
atgccttacagattaaaaagagaaacttttatctcgtctgctattgagaattgtgattac
ttagctatagatggagagttcactggtctcgactctggagatggtggacatgctgcacaa
tttgacacaccggctgagcgttacaacaagttaagatatggtgcaacagattttcttctg
attcagtttgggatgtgtacatttactgctgtagaacgtgaacacaatctctcgtcattg
atacaggtcatatttgcgtgcagtgctgtccactgtccattgacagccattgacctgtgt
aatttgcctgagtcgtgtgtcagaatctcttacctcacccctgaacaagaaaccaagctt
aaagcagaattagacaggaagcatgatgatatcaagaagttgtcttcccctgactcaaac
aattgtaacggttcaagtgtccagattgtcccagtaccagaggatcaaaagtcctttttg
aataatatatgtgaaagaataaccaactatctagaaggagaggatgcacagccattaatc
atccccccttgcaatgcatttcaaaggaagctcatttaccagactgtcattgaaaatata
gactttctaattgctcaaggtttcgatttcaacaaactctttaaagaaggaatctcctac
ctcacccctgaacaagaaaccaagcttaaagcagaattagacaggaagcatgatgatatc
aagaagttgtcttcccctgactctaacaattgtaacggttccagtgtccagattgtccca
gtaccagaagatcaaaagtcctttttgaataatatatgtgaaagaataaccaaatatcta
gaaggagaggatgcacagccattaattatccccccttgcaatgcatttcaaaggaagctc
atttaccagactgtcattgaaaaattcccacatgtacacctggaaaccaaaactggtgag
aaaagagagagatatatgtcagtgtccaaaacaaaaaacgcagatgacaggttgaaaaaa
gaacaagaaaaacaagctttggaaaagatggaactggacctagaagttggattctccaaa
gtgatcagagctattagtaaatctggaaaattagttgtagggcacaatatgttcttggat
gtggtccacattatcaatcagttccactcctctcttcctgaagaacacattaaatactct
tcacttgatgaactgaggcaaacattgagagggagcccattcacacctgcagaggtgggc
agagctcggaactcttccaaccattttactttaccatgctccagtcttgtagagccattt
attaataagttatttttaatgcgaattgctgatattccttatctgaatctgaatggtcct
gacttagagggcagcagagaccatgtctttcatgtcacattccctaaagaatggaagcaa
tcagatctgcattctttatttcaaccatatggtaacatacagatttcatggttgacagat
acaacttgttatgtggcattgtttaaaaaggaggttgcgaaaatagcgcttaagtctctg
tcccagacctcggggccatgtcatgttgtgtcctacgcttttcatcaccgcaacaaaaat
ttaagatggagtgcagcaacacccatgccctcccctacggtttcaatagtcaagaggaag
ttggtgactaccactactgacagtgaagccccgccccataaagtaaaacgacactcattt
cctacagaatgtcctcccattcctgaagaagatgaaatcactgaccatgtctcaagtagt
ctgaatgaaggcagtaagagcacta
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