Biomphalaria glabrata (bloodfluke planorb): 106052908
Help
Entry
106052908 CDS
T07368
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106052908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgt03041
]
106052908
Spliceosome [BR:
bgt03041
]
Complex C
Other components
Step II factors
106052908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_SCAP
PEP5_VPS11_N
WD_LRWD1
PQQ_2
Motif
Other DBs
NCBI-GeneID:
106052908
NCBI-ProteinID:
XP_013063825
UniProt:
A0A9U8DWH2
A0A2C9K688
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MAALLNLQEYDSDDKNDESGDEISEITSHLQPIKNPANSLSSSIALVAAPAVVSNEDNLG
LRHIDPKTKELKYNPKHDELFAPQVGPFNPFRTQQAKAVRNNLAGFAEPAHFSDFQFDNQ
RKTFTSYGFALDPSVDSGNVIETFVGSESSVLENHGKTVFETNASIEKNKKKRRREKNKD
PSDIEGYLGPWAKYKDEETVSRPSEEEQKELDEILAKRNKSGKQTEEKTMEEKSTLHVKD
AYDYQGRSFLHPPQDVGVNLKSEEPPEKCFLPKKLIHTWTGHTKGIAAIRWFPKYAHLIL
SAGMDCKIKIWEVYKERRCIRTYTGHKQAVRDVCFNNDGKEFLSCGYDRYCKLWDTETGE
CKARFTSRKVPYCIKFHPEEDKQHLFVAGTSDKKIVCWDIRSGEIIQEYDRHLGPVNSIT
FIDHNRRFVSTSDDKSLRVWEWDIPVDFKYIADPSMHSMPAVTLSPNGKWLACQSMDNKI
CVFNALNRMKFIRKKTFTGHMVAGYACGIDFSPEMSYITCGDADGKVYIWDWRSTKLYSK
FKAHDDVCINVLWHPHETSKLATAGWDGVIKFWD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgctgttaaatttacaggaatacgactctgatgacaaaaatgatgagagtggg
gacgaaatatccgaaataacaagtcatcttcaaccaattaaaaatccagctaattctctg
tcatcttctatcgcattagtagcggccccagcagttgtttcaaacgaagacaacttggga
cttcgacacattgaccccaaaactaaagagctaaagtacaacccaaaacatgatgaactg
tttgcacctcaagtaggccccttcaacccattccgtacacaacaggccaaagctgtgcgt
aataatctggctggatttgctgagccagctcatttcagtgattttcaatttgacaatcag
agaaagacatttaccagttatggctttgcactggatccaagtgtagacagtggaaatgtt
atagagacatttgtcgggagtgaatcctctgtccttgaaaaccatggcaagacagttttt
gaaaccaatgcatcgatagagaaaaataagaaaaaaaggaggcgagagaaaaataaagat
ccttctgacattgaaggctacttgggtccatgggcgaaatataaagatgaagaaacagtg
tctagacctagtgaggaagaacaaaaagagttggatgaaattttggcaaaacgtaacaag
tctggtaaacaaacggaagagaaaacaatggaagagaaatcgactttacacgtgaaagat
gcttatgactaccaagggagatcattcttacacccaccccaagatgttggtgtcaacttg
aaatcagaagagcccccagagaaatgtttccttcccaagaaactgattcacacatggact
ggtcataccaaaggaatcgctgccatcagatggttccccaaatatgcacatcttatttta
tctgcaggcatggattgtaaaattaagatctgggaagtgtataaagagagaagatgtatc
aggacctacactggtcacaaacaagctgtcagggatgtttgtttcaacaatgatggaaag
gaatttttgagttgtggctacgacagatattgtaaattatgggatacagaaacaggtgaa
tgtaaagctcgtttcactagtcgtaaagttccctactgcatcaagtttcacccagaggag
gacaagcagcatttgtttgtggctggaacctcagacaaaaaaattgtttgttgggatatt
cgttcaggggagataatccaggaatatgaccgccacttaggtccagtcaacagcatcaca
ttcattgaccacaaccgacgttttgtttccacatctgatgataagagcttaagagtctgg
gaatgggatattcctgtcgacttcaagtatattgctgatccttccatgcactcaatgcca
gctgtcactttatcacctaatggcaaatggttggcatgtcaatctatggacaacaaaata
tgtgtgttcaatgcactcaacagaatgaagtttataaggaaaaaaacatttactggtcac
atggttgctggatatgcttgtggaatagatttttctccagaaatgagctatataacttgc
ggtgatgctgatgggaaagtatacatctgggactggcgaagcaccaaactctactccaag
ttcaaggcccatgatgatgtttgtattaatgttttatggcatccacacgagacttcaaaa
ctggctactgctggatgggatggcgtcatcaagttctgggattag
DBGET
integrated database retrieval system
