Biomphalaria glabrata (bloodfluke planorb): 106053469
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Entry
106053469 CDS
T07368
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3-like
KO
K14323
protein CASC3
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03013
Nucleocytoplasmic transport
bgt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106053469
03015 mRNA surveillance pathway
106053469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106053469
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106053469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
106053469
NCBI-ProteinID:
XP_013064477
UniProt:
A0A2C9KJD3
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MSVTAIASVDKGRRRRVLDDEGEDDNNLHLPEATRPSECESEGEVPDIDLSEYESAVDEG
GDHEEGSEEGSESGTEDGSETESESGSETETEGEEYSEDEGLEEERQSGDGEEQPNNDKP
DDDEDKKNPAYVPRKGAFYEHDLRQGNEGPEAEQTVEEKXAKKKLWQDEGKWAHDRYSDD
SQAPKSREELIAIYGYDIRVADKPPEAPPRKPGREKGPRQHRIKDFVPKMAVIDTTEDGT
DSVPNLGDDGVILYGGPSPRNLRKSNMRNSDGRRGGRHVIRNDVDSFNNKNQYDNKNGND
ITNQTNEMVPKQIDKSEEFPSLVDTVRPANQRNDQYKKQVDLGNQLKNDQKVTHEKVSKP
ENVRQNDFRDKGFNKIQQSQDSRKDNSRYQQSFRDDRRGGFNNRNSNRERENSNRYQDEN
WRSSTIEEKDRYYRNEDYKQDFNRKPHFKGNDGQSLKTGNSSDGRGYSNRASRYEQPPRY
QQQQSPSDVSLINESREYTNTSYRLPEDKSKQKTTYNSSVSNTSNIVSDGGDGSTSQNVV
FSNKENVQTINVTITSTTTEKKSYAKERRAKGSARSMEGASVASHPDMQKFNLSSNVQYQ
GPPPGTVKIEPNMVAQSSAKRYSSQRQQGLGNQGVFTEPPPIENTSPKLYNPALPPPSYY
REHGSGQLPNPTSVQEFSPAMLPPAAAAALPYGLPVSTTVLPMPPNAQGIANPALFQPTA
GPPPVLAPSFLPAGMMYAGAPRVPPPGTPAGFPISIAYASPPPPPASVAASVVATQPPPQ
GTVPQPGIQQGAQHKKVYRGDITYYAPELQQPSRAHQKRPKAAIPIIDPQAVPRQKQKSD
QRSTPEKSSQLSHKYVSSPGNGNNAKGNQPSAQTSNAQKVKSPPTSHENKLFKPVEPNVE
TMTLESESTKKNLSSEADSGIDVTVNNESSSPTPTCDSVLAVHNIGGYDSDLKGSFAEPL
QSFKEEVEVVESLTKNVGDVALIDSDKNENFLVNVDHTVVHNSEVS
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgactgctatcgcttctgtagataaaggtagacgaagaagggtattagacgat
gaaggcgaagatgataacaatttacatttgccagaggccacgagaccatcggaatgtgaa
tcagaaggagaagttccagatatagatttatcagaatatgaaagtgctgtagatgaggga
ggggaccatgaagagggtagtgaagaaggaagtgagtcaggaacagaagatggctcagag
actgaatctgaaagcggttcagagactgaaaccgaaggggaagaatattctgaagatgaa
gggctagaagaagaacgtcagagtggagacggagaggagcagcctaataacgataagcct
gatgatgatgaagacaaaaagaatccagcatatgtaccccgtaaaggtgccttttatgaa
catgatttacgtcagggaaatgaaggacctgaagcagagcaaacagttgaggaaaagtga
gccaaaaaaaagttgtggcaggatgaaggtaaatgggctcatgacagatatagtgatgat
tctcaagctccaaagtctagggaggaactgattgctatctatggttatgatattagagta
gcagacaaacctcctgaggcccctccaagaaagcctggcagagagaaggggccaaggcag
catcgcattaaagactttgttccaaaaatggcagttatagatacaactgaagacggaaca
gattctgtaccaaatctaggggatgatggtgtgattctttatggtggtccttctccaaga
aatttgcgtaaaagtaatatgcgcaactctgatggcagacgaggtgggcgtcatgttatt
agaaatgatgtggattctttcaataacaaaaatcaatatgataacaagaatggtaatgac
attaccaatcaaactaatgaaatggtaccaaagcagattgataaatctgaggagttccca
agtttagtagatactgttcggccagcaaatcaaagaaatgatcaatacaagaaacaggta
gatctaggtaatcagttaaaaaatgatcagaaagttacacatgaaaaagtttcaaaacca
gaaaatgttcgtcagaatgattttagggataaaggctttaataaaattcagcaaagccag
gatagtcgtaaagataacagccgctaccagcaaagttttagggacgatagaagagggggt
tttaataaccgtaattctaacagagaaagagagaattctaatagatatcaggatgaaaat
tggagatcctcaactattgaagaaaaagataggtattatcggaatgaagattacaagcaa
gatttcaacagaaaaccacactttaaaggtaatgatgggcaaagcttaaagacaggtaat
tctagcgatggaagaggttactctaatcgagcaagcagatatgagcaaccgccacgttat
cagcagcagcagtctccaagtgatgtttcacttataaacgagtccagagagtacacaaac
acatcctacaggttgccagaagataaaagtaagcagaagactacttacaacagtagtgta
tctaacacgtctaacatcgtcagtgatggtggtgatggcagtacctcacagaatgttgtc
ttctccaacaaagaaaatgttcagactattaatgttaccatcacaagcacaactacagag
aagaaatcatatgctaaagaacgtagagctaaaggttcagctcgttccatggaaggagct
tcagtggctagtcatccagatatgcaaaaattcaacttgagctctaatgtgcagtatcaa
ggacctccgcctggtacagtaaaaattgaacctaacatggtagctcagtccagcgccaag
cgctattcatcgcagagacaacagggtttgggcaaccaaggtgtttttactgaacctcct
cccatagaaaacacaagccctaaactgtataacccagctttacctccgccttcatattat
agagagcatggttcaggtcagcttcccaatccaacaagtgttcaggaattctcccctgca
atgcttcctcctgctgctgctgctgctttgccttatggcctgccagtatctacaacagtg
cttccaatgcctcctaatgcacaagggattgcaaatcctgccttatttcaaccaacagct
ggccctccacctgtgttagcaccatcttttctacctgcaggcatgatgtatgcaggtgct
ccaagagtgccacctcctggtactcctgctggatttccaatctctatagcatatgcctca
cctccccctccccctgcatctgtggctgcctcagtggttgctactcagcctcctcctcaa
ggaactgtgccccaaccaggtatccagcaaggtgctcagcataaaaaagtgtacagagga
gatataacctattatgcacctgaattacaacagccatcaagagcacatcagaagagacct
aaagctgcaataccaattattgatccacaagcagtgcctcgtcagaagcaaaagtcagat
caacgatcaacacctgaaaagtcatcacagctgtcgcataaatatgtttcttcgcctggt
aatggaaacaatgctaaaggaaatcagccttcagctcagactagtaatgctcaaaaagta
aaaagccctcccacttcacatgaaaataaacttttcaaaccagtggaacctaatgttgaa
accatgacattggaatcagaaagtacaaaaaaaaatttgtcttctgaggcagactctggc
atagatgttacagttaataatgaatccagttcaccaactcctacttgtgattctgtgttg
gctgtccacaacataggtggctatgacagtgatttaaaaggatcctttgctgagcctctc
cagtctttcaaagaagaagtagaagtggtggaatccttgacaaagaatgttggggatgtg
gcattgatagattcagataaaaatgaaaattttctagtcaatgtggatcacacagtagtt
cataacagtgaagtttcataa
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