Biomphalaria glabrata (bloodfluke planorb): 106054958
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Entry
106054958 CDS
T07368
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106054958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bgt00536
]
106054958
Glycosaminoglycan binding proteins [BR:
bgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106054958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
106054958
NCBI-ProteinID:
XP_013066499
UniProt:
A0A2C9MAH7
LinkDB
All DBs
AA seq
1348 aa
AA seq
DB search
MAQWATWTECGLLLLLAFAAAIFAAPPQELNKEDVKASCYYKGQEYLHDDTWNPIDENKC
LQCHCDNGQVNCRFIDCPKFASAESSTELLQDVLTATSGDPGEPGAEGYPGRQGEMGEAG
EDGVNGVPGTPGMPGASEMGPSGGPGIPGMPGAKGHRGFNGFPGKRGNEGTAGEPGEAGP
PGPAGPLGPQGPRGPPGERGEDGSSGPQGMRGVDGLSGPPGSPGPAGNTGPPGVPGQQGP
KGEAGAQGAKGSIGQQGARGENGAAGVSGDPGRAGPTGQPGAPGEEGAQGDAGPAGSPGF
PGSRGPPGPAGSAGAPGAKGTAGDPGENGFKGSAGEKGAPGPAGDVGAPGPSGPAGSRGE
RGAPGPQGTAGPSGERGTPGARGLPGPSGSPGPKGADGVDGERGPRGEAGASGETGRPGP
PGAPGDAGPVGLAGPDGARGPPGPPGPSGADGKAGDMGPPGSPGNPGQQGAQGPQGERGN
PGKEGQPGTQGQRGPQGDAGPNGERGPPGPPGPEGEPGRAGPPGGRGANGFQGAPGPQGG
PGESGREGEPGPTGPDGPPGRAGYPGERGFPGPRGSPGPVGEAGAPGGPGPAGPAGPRGV
SGESGGQGEPGAPGPLGPLGERGPAGEPGEKGESGEAGLPGPNGSPGRPGKQGERGSVGP
QGEAGVPAPKGDPGETGELGQPGAAGRPGARGEAGPQGEQGIPGLVGAPGATGKKGEAGL
AGPKGEQGEVGAPGEPGQPGRVGDAGINGRRGPAGDPGVQGAPGESGPDGRAGLQGLPGP
QGNTGPTGPSGRPGIKGTFGDTGKQGRPGNNGAPGLAGSPGSKGQRGEDGIPGNEGPQGP
PGQQGHRGDPGIPGVPGETGPPGQNGPNGARGPPGKNGLDGYQGKPGEAGAPGPQGPPGE
PGPNGAPGNPGAPGLQGRQGEKGPEGELGNQGPPGNPGLQGPAGPSGSAGTAGERGPRGE
NGPEGPRGPTGAAGAPGPQGAAGPLGADGELGDNGDKGDPGWAGLPGLPGPEGPTGEPGA
RGAVGPPGPRGPDGNRGPVGPDGEDGPEGPPGPTGPRGPAGEDGRRGPQGETGRAGAPGP
PGQSVYASAITNWAQGAKADTWLRDSPTGEGRDTIEALKQVTEEIQKLRKPTGEKTSPAK
TCRDLAAAAGEEKLTDGLFWIDPNGGGVADAIQVFCKFSAEDLEETQTCLVPATSKFEKK
QWFSTKPSTDEYALFAETFSESEFSYQTHKSQVKFLQHLAKKARQHITVHCKNVVAGFDN
SNNTWSNAVKLVSFDEEDVTAQSKKIAFKYKIVEDTCKERNGKWGSTVIEVRGKEQLKRL
PILDIGLKDVAGSDQEFGIEIGQACFSS
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgggcgacttggacggagtgcggactgctgcttctgctagcgttcgcagcc
gccattttcgccgctccccctcaagagttgaacaaggaagatgtcaaagcaagttgttat
tataaaggccaagaatatctccatgacgatacctggaacccaatagacgaaaacaaatgt
ttacaatgccattgcgacaacggacaagtcaattgccgatttatcgactgccccaaattt
gcttcagctgaatccagcacagagctcctgcaggatgtcttgactgccacctcgggagat
cctggcgaaccaggagcagaaggctacccaggaaggcaaggtgaaatgggtgaagccggt
gaggatggtgtcaatggtgtacctggaacgcctggaatgcccggagcttctgaaatgggt
ccatctggtggccccggtattcctggcatgcctggagcgaaaggtcacagaggtttcaac
ggtttcccaggcaaacgaggaaatgaaggaacagccggtgaacccggagaagcaggaccc
cctggaccagccggaccattgggcccacaaggacctcggggtcccccaggagaacgaggt
gaagatggttcatcaggacctcagggtatgagaggagtcgacggtctgtccggaccacca
ggttcaccaggccctgctggaaacacaggtccacctggagtccccggtcagcaaggtccc
aaaggtgaagctggtgcacagggagctaaaggatctataggtcagcagggtgcacgtggt
gaaaatggtgctgctggagtctccggagaccctggtcgtgctggcccaacaggtcaacca
ggagctcctggtgaggaaggtgctcagggtgatgcaggtccagctggcagccccgggttc
cctggttccagaggtcccccaggtcctgccggttcagcaggtgctccaggtgccaagggt
actgctggtgaccctggtgaaaatggcttcaaaggctctgctggtgaaaaaggtgcacct
ggacccgctggtgatgttggagccccaggcccatctggccccgctggaagcagaggtgaa
agaggagctccaggtcctcaaggaacagctggcccttcaggagaacgaggtacacctggg
gcaagaggccttccaggtccaagtggttcacctggccctaaaggagctgacggtgtagat
ggtgaaagaggtcccagaggagaggctggagcatctggtgaaactggtcgaccaggccct
cccggagcaccaggagatgctggccctgttggattggctggacctgatggtgcaagaggc
cctcctggcccacccggaccttctggtgctgacggaaaagctggagatatggggccacct
ggtagtccaggtaatcccggacagcaaggggctcaaggacctcagggtgaacggggaaat
cctggtaaagagggccaacctggaacccaaggtcaaagaggaccacaaggagatgctgga
cctaatggagagcgaggacccccagggccaccaggaccagagggagaacctggcagggca
ggacctcctggtggtagaggtgctaacggttttcagggagctccaggaccccaaggtggc
ccaggtgagagtggaagagagggcgaaccaggacccacaggacctgatggaccacctggt
cgagctggctatcctggtgaaagaggtttccctggaccacgaggatcacctggcccagtt
ggagaggctggagcacctggtggccctggacctgctggtcctgcaggacctcgaggtgtt
tctggtgaatcaggtggtcaaggtgaacctggtgctccaggacctttgggcccacttggt
gagcgaggcccagctggtgaacccggagaaaagggagaatctggagaagccggcctgcct
ggaccaaatggatcacctggacgaccaggaaagcaaggagagcgtggatctgtcggacct
cagggtgaagctggtgtacctgcacctaaaggagaccccggagaaacaggagaacttggt
cagcctggtgctgctggacgtccaggtgctagaggagaggctggacctcagggcgagcag
ggcattcctggcttggttggtgctcctggtgctacaggcaagaaaggagaggctggtcta
gctggacctaagggtgaacaaggtgaagttggtgcacctggtgaacctggacaacctgga
cgtgtgggtgatgctggtattaatggtcgtcgtggacctgctggtgaccctggtgtccag
ggtgcccctggtgaatctggacctgatggaagagcaggacttcaaggacttccaggccca
caaggaaacactggacccactggtccatctggtcgtccaggaatcaagggaacttttgga
gacacaggtaaacaaggccgacctggaaacaatggtgctcctggtttagctggatcccca
ggatctaaaggacaaagaggagaggatggtattcctggcaatgaaggaccccaaggaccc
cctggtcagcaagggcatcgtggtgacccaggtattcccggtgttccaggagaaactgga
ccaccaggacaaaatggacctaatggtgccagaggacccccaggaaagaacggtttggat
ggctatcaaggaaaaccaggtgaggctggagcgcctggacctcaaggtccccctggtgag
ccaggaccaaatggagctcctggtaatcctggtgcaccaggtctgcaaggacgtcaagga
gaaaagggcccagaaggtgaacttggaaaccaaggtccaccaggtaacccaggtctgcag
ggtcctgctggcccaagtggttcagctggaacagctggtgaaagaggacctcgaggtgag
aatggacctgaaggaccacgtggacccactggagcagctggagccccaggaccacaagga
gctgctggacctcttggagctgatggagaacttggagacaatggtgacaagggtgaccct
ggatgggctggattacctgggcttcccggacctgagggacccactggagagccaggcgct
agaggagctgtaggacctccaggacctaggggacctgatggaaacagaggaccagtagga
cctgatggtgaagatggacctgaaggacctccaggaccaactggaccacgaggacctgct
ggtgaagatggtagacgaggacctcaaggagaaactggccgtgctggtgctccaggtcca
cctgggcagtctgtttatgcttctgcgataaccaactgggcacaaggagctaaagctgac
acttggctgcgtgactctccaactggagaaggtcgtgacacaattgaagcactcaagcag
gtgacagaggaaatccagaaactcagaaagccaacaggagagaagacctcacctgccaag
acatgtagggatcttgctgctgcagctggagaggaaaaactgacagatggactcttctgg
attgatcctaatggtggtggagttgctgatgccatccaagtgttctgtaagttcagtgcc
gaagacctggaggaaacacagacatgcctagttccagcaacctctaagtttgaaaagaaa
caatggttcagcacaaagccttcaaccgatgagtatgccttgtttgccgaaaccttttct
gaatcagagttctcttatcagacacacaagtcccaggtgaaattcttgcagcatctggcc
aagaaagccaggcaacacatcacagtgcactgcaagaatgtggtggccggctttgacaac
agcaataatacctggagcaatgctgtcaagttggtcagctttgatgaggaggatgttacc
gcccagtccaagaaaatagccttcaaatacaaaattgtggaggatacttgcaaggagaga
aatggtaaatggggctcaacagtcattgaagtccgaggcaaagaacagctcaagagatta
cctatactagacataggtctaaaagatgttgcaggtagtgatcaagaatttggcattgaa
ataggtcaagcttgttttagcagctga
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