Biomphalaria glabrata (bloodfluke planorb): 106055209
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Entry
106055209 CDS
T07368
Name
(RefSeq) ATP-dependent RNA helicase cgh-1-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106055209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106055209
03036 Chromosome and associated proteins [BR:
bgt03036
]
106055209
Enzymes [BR:
bgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106055209
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106055209
mRNA degradation factors
5'-3' decay
Decapping complex
106055209
Chromosome and associated proteins [BR:
bgt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106055209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106055209
NCBI-ProteinID:
XP_013066850
UniProt:
A0A2C9JEM6
LinkDB
All DBs
AA seq
461 aa
AA seq
DB search
MAKEELRQNDNANEQGWKAKLNVPPPDHRIRTSDVTNTKGNEFEDFCLKRDLLMGIFEKG
WEKPSPIQEASIPIALTGRDILARAKNGTGKTGAYAIPCLEKVDASKDLVQALIIVPTRE
LALQTSQICIELSKHIGCRCMVTTGGTNLKDDILRLTEPVHVIIATPGRILDLMNKNLVK
IQNCGTLILDEADKLLSQDFKGMLDSIIGHLPKDRQIMLYSATFPLTVEAFMRKHLKNPY
EINLMEELTLKGVTQYYAFVQEKQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITE
LGYSCYYIHAKMNQQHRNRVFHDFRKGLCRNLVCSDLFTRGIDIQAVNVVINFDFPKHSE
TYLHRIGRSGRYGHLGVAINLITYDDRFALHKIEQELGTEIKPIPKTIDPSLYVAEAQQV
DPEAEEEYYRQQQNQQQQRTNNNHQQQAPRGQPTHQQQTVA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaggaattgagacagaatgataatgctaatgagcaaggttggaaggctaaa
ctaaatgttcctcctccagatcacagaatcagaacatctgatgtgaccaacacaaagggt
aatgaatttgaggacttttgccttaaaagagacctattgatgggaatatttgaaaaagga
tgggaaaagccatcacctattcaagaagcaagtattccaatagctctaacaggccgggat
attttagcacgtgcaaaaaatggaacaggcaagactggagcatatgccattccttgtttg
gaaaaagttgatgcttctaaagatttagtacaagctcttatcatagtacctacccgagaa
cttgccttgcagactagtcagatttgcattgaacttagcaaacatattggttgtcgttgc
atggtaactactggaggcacaaatcttaaagatgatattttgaggttaacagaaccagtt
catgtaataatagcaactcctggacgcattcttgatttaatgaacaaaaacttggttaaa
atacagaattgtggaacacttattttagatgaggctgataagttattgtctcaagatttc
aaaggcatgcttgatagtattattggtcatttacctaaagatagacaaataatgctttac
tcggctacattccctctaactgtcgaggctttcatgagaaaacacctgaaaaacccttat
gaaatcaatctcatggaggagcttactttaaaaggagttacacaatactatgccttcgtt
caagaaaaacaaaaggttcactgtctcaatacattattctcaaaacttcaaattaaccag
tccattatattctgcaattctacacaacgtgttgagttgctagcaaaaaaaattacagaa
ctaggttattcttgttactatattcatgctaagatgaaccaacagcatcgcaatagagtg
tttcatgacttccgaaaaggactctgtagaaatctagtatgctcagatctatttactaga
ggtattgacatccaagctgtaaatgttgttataaactttgacttccctaaacattcagag
acctacctgcataggattggtaggtctggaagatatgggcatcttggtgttgctataaat
ctaatcacatatgatgacagatttgctcttcacaaaatagaacaagagctgggtacagaa
atcaaacctatcccaaagacaattgacccgtccttatatgttgctgaagctcagcaagta
gaccctgaagctgaagaagaatactatagacaacagcagaatcaacagcagcagcgaact
aataacaatcatcaacagcaagcgccaagaggacaaccaactcaccagcagcaaactgta
gcttga
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