Biomphalaria glabrata (bloodfluke planorb): 106056099
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Entry
106056099 CDS
T07368
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106056099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgt03041
]
106056099
03009 Ribosome biogenesis [BR:
bgt03009
]
106056099
Enzymes [BR:
bgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106056099
Spliceosome [BR:
bgt03041
]
Complex A
U2 snRNP components
U2 related factors
106056099
Complex B
106056099
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106056099
Ribosome biogenesis [BR:
bgt03009
]
Eukaryotic type
90S particles
Helicases
106056099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
AAA_19
AAA_22
nSTAND3
SRP54
ResIII
NACHT
Flavi_DEAD
AAA_25
ABC_tran
AAA_7
TsaE
T2SSE
TrwB_AAD_bind
AAA_29
Motif
Other DBs
NCBI-GeneID:
106056099
NCBI-ProteinID:
XP_013068145
UniProt:
A0A2C9JGM1
LinkDB
All DBs
AA seq
731 aa
AA seq
DB search
MSKRRIDVGDSMSSSKKNRDDDTAGDKKEDKGKSQSIFEQFNIPRPTLQLNPFTGLPFTP
RYYELHRKRTTLPVWEYKERFVEMVTKHQTIVLVGETGSGKTTQIPQWCLEWVRARNPKK
GVACTQPRRVAAMSVAQRVSEEMDVCLGQEVGYSIRFEDCTSQKTVLKYMTDGMLLREAM
SDPLLEAYGIIMLDEAHERTLATDILMGLLKEVAKQRSDLKIIIMSATLDAGKFQTYFDN
APLMSVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEETEGDMLLFLTGQEEIDEAC
KRIQREVDNLGQDVGDLKCIPLYSTLPPNLQQRIFEPPPPKKANGAIGRKVVVSTNLAET
SLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYT
EKAYKQEMQENTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYL
AALDDDGEITELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPLEA
KKAADESKMRFAHIDGDHLTLLNVYHAFKQNHEDPQWCYDNFVNYRSLKSADNVRQQLAR
IMDRFNLRRSSTEFTSRDYYINIRKALVSGFFMQVAHLERTGHYLTVKDSQVVQLHPSTV
LDHKPDWVLYNEFVLTTKNYIRTVTDVKPEWLVKIAPQYYDMVNFPMCEAKRQLERIIAK
LQTGKGSNNSY
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgacgaatcgacgttggggatagtatgtccagcagtaaaaagaacagggat
gatgatactgcaggagataaaaaagaagacaaaggaaaatctcaatcaatatttgaacag
tttaacataccaagaccaacattacagcttaacccgttcacagggctacctttcacacca
cgctattatgagttgcatcgtaaaagaaccacacttccggtttgggaatacaaggaaaga
tttgtggaaatggttacaaaacatcaaaccattgtactagtgggtgaaacaggttctgga
aaaacaacgcagattccgcagtggtgtctagaatgggtgcgagctaggaatccaaaaaag
ggtgtggcatgtacacaacctcgtagggtagcagctatgtccgtggctcaacgtgtgtct
gaggaaatggatgtttgtcttggtcaggaggttggttatagcatcaggtttgaagactgc
acatcccaaaagacagtactaaaatacatgactgatggtatgttgctcagagaagccatg
tcagatcctttactagaagcttacggtatcattatgctagatgaggctcacgaacgtact
cttgctaccgacatattgatgggtttactgaaagaagtagctaaacaaagatctgatctt
aaaatcattatcatgagtgctactttggatgctggcaaatttcagacctattttgataat
gctccattgatgagtgttcctggcagaacacatcctgtagaaatattttacacacctgag
cctgagagagactatcttgaggcagctataagaacagtcattcaaatccacatgtgtgag
gagacagagggagacatgcttttatttttgactggtcaagaggagattgatgaagcctgc
aaaaggattcaaagagaggtggataatttgggtcaggatgtgggggatctcaagtgtata
cctttgtattcaacattgccaccaaatttacaacagagaatttttgaaccacctccacct
aaaaaggccaacggtgcaataggaaggaaagtggtggtctctacaaacttagccgagaca
tctctgactattgatggtgttgtgtttgtcattgacccaggttttgccaaacaaaaggta
tacaaccctcgtattcgtgtggagtcacttttggtcactgctatttccaaagctagtgca
caacaaagagcaggtagagccggtcgaacacgacctggcaaatgctttcggttgtataca
gaaaaggcttacaagcaagaaatgcaggagaacacctatcctgaaattttgaggtctaac
ttggggacagtagtactacagcttaaaaaacttggtattgatgatttggtacactttgac
tttatggaccctcctgctccagaaacactgatgcgagctttggagttgttgaactattta
gctgcccttgacgatgacggtgaaataacagagcttggctccatgatggcagaattccca
ctagatcctcagctggctaagatggtcatagcaagctgcgactacaattgttccaatgaa
gtactgtccataacagccatgttatcagtcccacagtgttttgtgagaccgctggaggcc
aagaaagcagctgatgagtcaaagatgaggttcgctcacattgatggcgatcacctcact
ctactcaatgtgtatcatgctttcaaacaaaatcacgaagatcctcaatggtgctatgat
aactttgtcaactacagatctttgaagagtgcagacaatgttcgacaacagcttgcgagg
atcatggaccgtttcaacttacgcagatcaagcacagaattcacatcaagggattattat
attaacattagaaaagctctagtatctggattctttatgcaggtagctcacctggaaaga
actggtcactatttgactgtgaaagatagtcaggttgtccagctgcatccatccacagtt
cttgaccataaaccagactgggtactatataatgagtttgtactgaccaccaagaactac
attcgcacagtaactgatgtgaaaccagaatggcttgtgaaaattgcacctcagtactat
gacatggtcaatttccctatgtgtgaagccaagagacaacttgaaagaattattgccaag
ctacagaccgggaaaggatccaacaacagttattaa
DBGET
integrated database retrieval system
