Biomphalaria glabrata (bloodfluke planorb): 106057174
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Entry
106057174 CDS
T07368
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt04512
ECM-receptor interaction
bgt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106057174
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106057174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bgt04147
]
106057174
00536 Glycosaminoglycan binding proteins [BR:
bgt00536
]
106057174
Exosome [BR:
bgt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106057174
Glycosaminoglycan binding proteins [BR:
bgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106057174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106057174
NCBI-ProteinID:
XP_013069719
UniProt:
A0A9U8E232
A0A2C9MA14
LinkDB
All DBs
AA seq
1777 aa
AA seq
DB search
MIMKKTRNGELLLLSVLVTILGLADVSNGQCAGCSPPCICPGIKGLPGEKGLPGLRGSEG
FPGHPGPEGPPGPPGRKGNAGEPGAEGPKGFRGPNGLEGSQGNPGNDGQDGLEGPMGPDG
FPGCNGTKGIRGLPGPFGPAGPRGEPGVQGFNGMKGDPGEFLGFVTAMKGEPGVPGRRGL
TGLRGLKGDSGPYGPRGDPGLDGIPGNDGFKGDKGDIGFSPEPKGGQPGDKGEPGDPGVA
GYEGKDLNITSPKGEVGVPGEQGPRGPEGDPGDPGLPGDLGPQGPKGVTGLPGMPGPSGR
PGKRGKEGPQGPYGLKGESGDPGFPGVDGRDGIKGMRGEDGFKGRQGPQGDPGPQGPYEE
GVKGAPGPRGRNGDPGDRGIPGEIGLPGKEGPKGDAGLPGFPGRDGLRGLQGDPGTSRKG
DRGYPGEYGRDGLDGDPGLPGLPGDPGMPGAPGDNIAGQIGGRGRKGLTGLPAQIGPSGD
SGDRGEKGKAGIGFDIIGPPGPRGLPGDRGDPGLNGEDGIPGPYGTKGEPGDDCELCLDG
QDGEPGEVGDVGTPGTNGRPGFQGPIGLKGEPGSPGLKGLSGLNGPPGKRGLPGAAGDDG
PKGKRGDVRTSVLDEGIYQGPPGLKGDIGYPGPPGPDGPMGLVGERGLDGVFGNPGQMGD
DGDLGDPGLDGEDGRNGILGAKGDKGETAYGRKGEKGIRGTVGMDGSKGLDGAKGLRGDP
GNRVDGVKGEPGFPGLNGIPGLPGESGEQGLQGEDGDFGLDGFPGEIGRIGDQGEVGPKG
FEGPDGPKGYNGIPGEVGLPGLPGLKGSKGDAGLPGVPGYKGSRGPPGDEPVLTSALKGP
RGDPGRIGFKGEPGPRGRPGLEGEMGPLGAPGEKGNAGRPGFRGMTGRPGEPGPVIFGPQ
GPKGFPGDRGDEGDPGFPGENGEDGLPGIAGKPGGDGDDGKEGRSGPPGDRGLDGFPGEQ
GVDGLPGIDGERGMPGDRGMPGGPGVTGITGEFGEPGEDGLTGDDGIPGYPGLQGMEGLV
GMPGEPGEEGVPGTNGVPGSRGDDGLQGFPGDPGYPGSNGDPGPEGPPGRMGRKGSSGPS
EVGFEGSKGEVGDPGLPGDWGVDGIDGEPGAPGAPGLPGLQGSPGSPGPRGANARNGIKG
ARGPKGVRGLPGFEGEKGPLGDRGFDGPEGLPGFPGAKGGRGDTGYPGLPGEKGNNGETG
EDGFDGAIGEPGFEGPIGETGMAGFPGDRGDKGIRGRPGEYGRRGLRGTPGIPGNRGRKG
DQGDQGPQGPNGQKGEDAPLGLPGPPGFDGTPGYPGRNGVKGRKGEVGPEGFDGNKGIKG
DTGVGRPGPKGAPGESGFQGIPGRPGQKGQSGLAGVNGFRGMSGDKGFKGRAGRPGSEGD
PGPIGKEGYPGKPGERGLKGNPGRPGAPGPRGLKGFRGEQGEEGGRGMKGAKGDKGLAGR
PGPEGPNNIILHDRVGPKGFKGETGSPGPKGNQGMKGIQGPKGVRGVKGDLGEDGQPGFF
GEIGLEGFSGAPGRDGIPGLPGSAGPIGDIGEPGQPGTGPGIVFTRHSQTTGLAICPEGT
TKLWDGYSLLFVMGNGRAHGQDLGSAGSCLTQFNVMPFMFCNINGVCTVASRSDYSYWLS
SPQAMTNSMAPVSGEAIRDYISRCAVCETPSPIIAVHSQDIVAPSCPFGWSEVWVGYSFI
LSTGAGSQGSGQPLDSPGSCLEDFRPQPFIECHGRGTCNYYATSYSFWMATIENSTQFSQ
PIAETIKSGDLRRRASRCVVCIKNFPSDLDFFRMNKK
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgattatgaagaaaacgcgaaatggagaattgctcctcttgtctgtattagtaacgatt
cttggactagcagatgtttctaatgggcaatgtgcaggatgttcacctccatgtatttgt
ccaggcatcaaaggattaccaggagagaaaggcttgcctggtctaagaggatcagaaggc
tttcctggtcatccaggaccagagggaccaccaggtccacccggcaggaaaggaaatgct
ggtgaacctggtgctgaagggcctaaaggatttaggggtccaaatggtttggaaggatct
caaggcaatccaggaaatgatggtcaagatggtttggagggacctatgggtcctgatggc
ttcccaggatgcaatggtactaagggtataagaggtctaccaggtccatttgggcctgct
ggtcctagaggagagcccggtgtacaaggctttaatggcatgaagggtgaccctggagaa
tttttaggctttgtaacagccatgaaaggtgaaccaggtgtcccagggcgtcgtggtctg
actggtctaagaggcttgaaaggtgacagtggtccttatggtcctcgtggtgatccaggt
cttgatggtataccaggtaatgatggattcaaaggtgataaaggagatattggcttttca
cctgagccaaagggaggccagccaggtgacaagggtgaaccaggtgatcccggtgtagct
gggtatgaaggcaaagatttaaatatcacaagtcctaaaggtgaagtaggtgtacctggt
gaacagggcccccgagggccggaaggtgatccaggtgatcctggactaccaggagatctg
ggaccccaaggaccaaaaggtgtaactggactacctggtatgccaggaccttctggacgc
cctggtaagcgtggtaaggaaggtccacaaggtccatatggcctgaaaggtgagagtgga
gaccctggttttcctggagtagatggcagagatggtattaagggtatgagaggagaggat
ggttttaaaggaagacaaggacctcagggtgacccgggacctcaaggcccttatgaagag
ggtgtaaaaggtgcccctggaccaagaggaagaaatggtgaccctggtgacagaggcatt
ccgggggaaataggtttgcctggaaaggaggggccaaaaggtgatgctggattacctggc
tttccaggaagggatggactacgaggcttgcaaggagatccaggaacatctaggaaagga
gaccgaggatatccgggtgaatacggtagggatggcttagatggagatcctggattacct
ggattacctggagacccaggtatgccaggagcacctggtgataatattgcaggccaaata
ggtggtaggggccgcaagggtctaactggtctaccagctcaaattggaccatctggcgac
tctggtgacaggggagagaaaggaaaagcaggcataggatttgacattattggaccacct
ggaccacgtgggcttcctggagatagaggtgatccaggtctcaatggagaggatggaatt
cctggtccttatggtacaaaaggtgaacctggtgatgattgtgagctgtgcctggatgga
caagacggtgaaccaggcgaagttggagatgtgggcaccccagggaccaatggtcgccct
ggattccaaggtcctattggcttgaaaggtgaacctggaagtcctgggttaaaaggtcta
agtggtctgaacggacctccaggtaaacggggcctgccaggagctgccggagatgacgga
cctaaaggaaaaagaggtgatgtgagaaccagcgttttagatgaaggaatttatcagggt
ccccctggtctaaaaggtgacattggctaccctggtcctccaggtcctgatgggcctatg
ggactagttggtgaacgtggtttagacggtgtgtttggaaatccaggtcaaatgggtgat
gatggagatttaggtgatccaggcctggatggagaggatggtagaaatggaattctaggt
gcaaagggtgacaagggagaaactgcttatggaaggaaaggagaaaaaggcattcgtggt
actgtagggatggatggtagcaaaggtcttgatggtgcaaaaggtctgaggggtgatcct
ggcaacagagtagatggagttaaaggagaaccaggctttcctggtttaaatggtattcct
ggattacctggagaatctggtgaacaaggcctacaaggagaagatggggactttggatta
gatggcttcccgggcgaaataggacgtataggagaccagggagaagttggtccaaagggc
tttgagggtccagatggacctaagggctataatggtatccctggagaggttggtcttcct
ggtttaccaggtttgaaaggatctaaaggagatgcaggcttacctggagtacctggctat
aagggctcaaggggtccacctggagatgagcctgtcttaacttcagccctaaaaggtccc
agaggagatccaggaagaatcggttttaagggtgagcccggacctagaggaagacctgga
cttgaaggagaaatggggccactgggtgcccctggtgaaaaaggcaatgctggtcgacca
ggattcagaggaatgacaggtcgtccaggagaaccgggcccagttattttcggccctcaa
ggaccaaaaggctttcctggcgatagaggagatgaaggagatccaggtttcccaggtgag
aatggagaagatggactgccaggtatcgctggtaagccaggaggggatggagatgacggg
aaagaagggcgctctggacctcctggagataggggcttggatggcttccctggagaacaa
ggtgtagatggcttacctggaatagacggtgaaagaggaatgccaggagataggggaatg
ccaggaggacctggtgtgacaggaattactggtgaatttggcgaaccaggggaagatggt
ttaactggtgatgacggtatccctggatatccaggcttacaaggaatggagggacttgtg
ggtatgcctggcgaacctggtgaggaaggtgtaccaggaacgaatggagtacctggaagc
cggggtgatgatggacttcaaggtttccctggggatccaggatatcctggtagtaatggt
gatccaggacctgagggaccacctggcaggatgggaagaaaaggttcatctggtccatca
gaagtaggatttgaaggtagcaaaggtgaagttggtgatcctggacttcctggagattgg
ggtgttgatggcattgatggagagccaggtgctcccggtgctccaggtttgccaggattg
cagggctcccctggaagtccaggaccaagaggtgccaatgcaagaaatggtattaaggga
gcaagaggccctaaaggtgttaggggtttgcctggatttgagggagagaaagggccactg
ggtgatcggggttttgatggccctgagggattacctggatttcctggagctaagggagga
cgaggtgacacaggatatccagggctacctggagaaaagggaaacaatggtgaaactgga
gaggatggatttgatggtgccattggagagccaggttttgaaggacctattggagaaaca
ggaatggctggtttcccaggggacaggggtgacaaaggcattagaggcaggcctggagaa
tatggaagaagaggcttacgtggaactcctggcataccaggaaaccgtgggagaaaggga
gatcaaggagaccaaggcccacaagggccaaatggacaaaaaggagaagatgctcctctc
ggtctgcctggacctcctggatttgatggaacacctggctaccctggcagaaatggtgtt
aaaggcagaaaaggagaggttggccctgaaggttttgatggtaataaaggtatcaaaggg
gacactggtgttggcaggcctggacccaaaggagcacctggagagtctggcttccaaggc
attcctggtcgacctggccagaaaggacaaagtggtttagcaggagtaaatggatttaga
ggcatgtcaggagacaaaggtttcaagggtagagcaggccgtcccggctctgaaggggat
ccaggacccattggtaaagagggctaccctggaaaaccaggtgaaagaggtctgaaagga
aatcctggcaggcctggcgcacctggaccaagagggttaaaaggtttcagaggtgaacaa
ggagaagagggcgggaggggcatgaagggagctaagggagacaaaggtttggcaggaaga
cctggtcctgaaggacctaataatataatcttgcatgatcgtgttgggcccaaaggattt
aaaggtgaaactggtagcccaggtcccaaaggaaatcaaggaatgaaaggtattcaaggt
cctaaaggtgtaaggggtgtgaaaggtgacttgggcgaagatgggcaaccaggttttttt
ggtgaaattggtttagagggtttcagtggcgctcctggacgggatggcatacctggttta
cctggttcagctggtcctataggtgatattggggaacctggccagcctggcactgggccc
ggtattgttttcacaaggcacagtcagacaactggattagccatatgtccagagggaaca
acaaaattatgggatggctactcattattgtttgtcatgggtaatggccgtgctcatggc
caggacttgggttctgctggttcctgtctcacccagttcaatgtcatgcccttcatgttc
tgcaatatcaacggggtttgcacagtagcatcacgttcagactacagctactggttgagt
tcgccgcaggctatgaccaactccatggctcctgtaagtggggaagccatcagagactac
atcagtagatgtgctgtttgtgaaactccatcaccaattatagccgtccatagtcaagac
attgtggccccgtcttgtccatttggatggtctgaagtttgggttggctacagctttatc
ttgagcactggagctggttcccaaggatctggccagcccttagactcaccaggctcttgc
cttgaagatttcaggccacagcctttcatagagtgccatggccgtggtacgtgcaattac
tatgccacatcgtacagtttttggatggccactatagaaaacagcacgcagttcagtcag
cctatagctgaaactattaaatctggggacctccgtaggagagccagcaggtgtgttgta
tgcatcaaaaactttccctcagatctagacttttttagaatgaacaaaaaataa
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