Biomphalaria glabrata (bloodfluke planorb): 106057492
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Entry
106057492 CDS
T07368
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106057492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgt03041
]
106057492
Enzymes [BR:
bgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106057492
Spliceosome [BR:
bgt03041
]
Complex A
U2 snRNP components
U2 related factors
106057492
Complex B
106057492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
CdAMP_rec
Flavodoxin_3
Motif
Other DBs
NCBI-GeneID:
106057492
NCBI-ProteinID:
XP_013070147
UniProt:
A0A2C9JK71
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MAMDSFGDSLYRKILTTLTPLLFSLHLCCIIYFLLRSYRKRSSSRERDRKKRSRSRSRSR
RSRSRERVRRSRSRERKRSRSRDRDRRDKRKRSSSRDRGSKRRSRSRSRSSSPTKTKKGS
SKSPTPERKKISPTSAENKVKDEPIDKEEEQKRLEVEMQKRRERIEQWRAERKKTQELVP
LNIAPVSRKWTLEDDDDEEEDGGGEKKNEDDELDPLDAYMQSVNDEVKVLKDKDKKPLGE
NDVQGKVVTRITTVVKKKQEDPSKNKGELMLNNMDALEYSSEEEEEDLDSTMANLNKRKK
DLGAVDHEKIYYAPFRKAFYVEVPEITKMTQEEVDAYRNELEHIAVRGKHCPKPIKTWAQ
CGVSKKVMEALKKHKYEKPTPIQAQAIPAIMSGRDVIGIAKTGSGKTLAFVLPMIRHILD
QPPLEENDGPIAVIMIPTRELALQIAAECKKFTKAHNLRAVCVYGGTGISEQIAELKRGC
EIIVCTPGRMIDMLTANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMKIIDNVRPDRQT
VMFSATFPRQMEALARRILNKPIEVQVGGRSVVCKDVTQQVILIEEDKKLFKLLELLGLY
AEQGSILVFVDKQEHADDLMKDLLKHSYTCLSLHGGIDQYDRDSIIQDFKSGTIKLMVAT
SVAARGLDVKQLILVVNFDCPNHYEDYVHRCGRTGRAGNKGFAYTFITSEQGKYAGDIIK
ALELSGQPVPEEVQKLWDAYKEEAKALGKTVKSSSGFHGKGFKFDETEAQLADERKKLQK
AALGLHDSDDEDGGAAVSIDQKIEDMFASRKRVTDVAKPMINQNIGAQNQNQGGQNNQQK
LELARKLAAKINYQKNLGTDAPDISQQAAIAIMKGDSVVVPQVASKTIAEQLAEKLNARL
GYKPQSEEEQITLELTPGETFKRYEEELDINDFPQTARWKVTSREALATISEFSEAGITV
RGSYFPQGKEPKEGERKLYLAIEATSELAISKAKAEIIRLIKEELIRLQNSYQPINRGRY
KVL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggccatggacagttttggtgatagtctttatagaaaaattttaacaacactaactcca
ttattattttcactgcatctttgttgtattatttattttttactcagatcttacaggaaa
aggtcatcatctagagaaagagatagaaaaaaacggagcagatctcgaagtagatcaagg
cgttctaggtctagggaaagagtgaggagatcaagatcaagggaaagaaaacgaagtaga
tctagagacagagaccgtcgagataaaagaaaaagatcatcatcaagggatcgtggcagc
aagcgtaggtcaagatccagatctagatcatcttctccgacaaaaacaaaaaaaggttcc
tctaaatctccaacaccagaaagaaagaaaatttctcctacatcagctgaaaataaagtc
aaagatgaaccaattgataaggaagaagaacagaaacgtttggaagtggagatgcagaaa
cgaagagagcgtattgagcagtggagagctgaaagaaaaaagacacaggaactggttcct
ttaaatattgctcctgtcagtagaaagtggacattagaagatgatgatgatgaagaggaa
gatggaggaggagagaaaaaaaatgaagatgatgagttagatccactggatgcctacatg
cagtcagtgaatgatgaggtcaaagttctgaaagataaagacaagaaaccattgggggag
aatgatgtacaaggaaaagttgttacacgaataacgacagtggtgaaaaagaaacaggaa
gatccgtctaagaataaaggtgaacttatgttgaataatatggatgctttggagtattca
tctgaagaagaagaagaagacttggattcaacaatggccaatttgaataagcgcaaaaag
gacttgggtgctgtagatcatgaaaaaatctattatgcaccctttaggaaagctttttat
gttgaagtgcctgaaataaccaaaatgacacaagaagaggttgatgcttataggaatgag
cttgaacatatagcagtgagaggaaaacattgccctaaacctattaaaacatgggcccag
tgtggcgtcagtaaaaaagtcatggaagctttgaaaaaacacaaatatgaaaaaccaaca
ccaattcaagctcaagctattccagccatcatgtctggtcgagatgtcattggcattgct
aaaacaggtagtgggaaaacattggcttttgtgttgcccatgatacgacatattttagat
caacctccactggaagaaaatgatggaccaattgctgtcataatgattccgaccagagaa
ctggctctacaaattgcagcagagtgtaagaagttcacaaaagcacataaccttagagct
gtttgtgtttatggtggcacagggatatctgagcaaattgcagagttaaaaagagggtgt
gagatcatagtttgtacccctggtcgtatgattgacatgttgacagccaacagtggacga
gtcactaacttgagaagagtgacatacattgttcttgatgaagcagatcgaatgtttgat
atgggctttgaaccccaggtaatgaaaataattgacaatgttcgtcctgatcggcaaact
gttatgttttctgcaacatttcccagacagatggaagcattggctcgtcgaatattaaat
aaaccaatagaggttcaagttggaggtcgcagtgttgtttgtaaggatgtaacacaacaa
gtgattctcattgaagaagacaaaaagttattcaaactcctggagctgcttggcttgtat
gcagaacaaggaagtatcttggtgtttgtggataaacaagagcatgctgatgatctgatg
aaagacctcctgaaacactcctacacttgcttatcactacacggtggcatagatcagtat
gacagagatagtattattcaagattttaaatctggaaccatcaaacttatggttgctaca
tcagttgcggctagaggtttggatgttaagcaattaatacttgttgtaaattttgattgt
cccaaccattatgaagattatgttcatcgatgtggccgaacaggcagagcaggaaacaaa
ggatttgcatacacttttataacatcagaacaaggcaaatatgcaggagacattataaaa
gcattggagctctctggtcagcctgttcctgaggaagtacagaaattatgggatgcatat
aaagaggaagctaaagctctcggtaaaacagtgaagagttctagtggctttcatggaaaa
ggttttaagtttgatgaaacagaggctcaactggctgatgaacgcaagaaattacagaag
gcagcactaggtttacatgattctgatgatgaagatggtggagctgctgtgtctatcgac
cagaaaattgaagacatgttcgccagccgtaaacgtgtgactgatgttgctaaacccatg
ataaaccaaaatataggtgcacagaaccagaatcagggtggacaaaacaaccagcagaag
ctggagttggctagaaaattggctgccaaaattaactatcagaagaatcttggcacagat
gctccagacatcagccagcaggcagctattgccatcatgaaaggagactcagttgtagta
cctcaagttgcatccaagacaatagctgaacaattggctgaaaagttaaatgcacgttta
ggctataaaccacaatctgaggaggagcagatcactcttgaactaactcctggtgaaact
tttaagagatatgaagaagaattggatatcaatgacttcccccaaacagcaaggtggaaa
gtcacatcaagggaagctttagctaccatatcagaattttctgaagctggtattacagtc
aggggctcttacttccctcaaggcaaagaacccaaagaaggtgaacgtaaactttatttg
gctattgaagccaccagtgaacttgccatcagcaaggctaaggcagagattataagacta
attaaagaagagttgatacgactgcaaaactcttaccaaccaatcaacagaggtcgttac
aaagttttgtga
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