Biomphalaria glabrata (bloodfluke planorb): 106058106
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Entry
106058106 CDS
T07368
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03013
Nucleocytoplasmic transport
bgt03015
mRNA surveillance pathway
bgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106058106
09122 Translation
03013 Nucleocytoplasmic transport
106058106
03015 mRNA surveillance pathway
106058106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106058106
03041 Spliceosome [BR:
bgt03041
]
106058106
03009 Ribosome biogenesis [BR:
bgt03009
]
106058106
03012 Translation factors [BR:
bgt03012
]
106058106
Enzymes [BR:
bgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106058106
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106058106
mRNA cycle factors
Stress granule specific factors
106058106
Spliceosome [BR:
bgt03041
]
Complex C
Other components
EJC/TREX
106058106
Ribosome biogenesis [BR:
bgt03009
]
Eukaryotic type
90S particles
Helicases
106058106
Translation factors [BR:
bgt03012
]
Eukaryotic type
Initiation factors
eIF-4
106058106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
AAA_30
TniB
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
106058106
NCBI-ProteinID:
XP_013070932
UniProt:
A0A9U8E3A3
A0A2C9JKR4
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MAERRVMPDDLKNIEFETSEDVDVTPTFDHMGLREELLRGIYAYGFEKPSAIQQRAVKPV
IKGRDVIAQAQSGTGKTATFSISILQCLDTSIRETQALILSPTRELAVQIQKVILALGDY
MSVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIKRRNLRTRSIKMLVLDEADEM
LKKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRRVLITTDVW
ARGIDVQQVSLVINYDLPNSRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDIEQYYA
TQIDEMPMNVADLI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgacgcgttatgcccgatgatttaaagaatattgaatttgaaacaagtgaa
gatgttgatgtcacacccacctttgatcatatgggccttcgtgaggagttacttagagga
atatatgcttatggttttgagaaaccatctgccatccaacagagagctgtcaaaccagtt
ataaaaggaagagatgtgattgcacaagctcaatctggaacaggtaaaacagccacattc
tccatctctattttacaatgtttggacacgtctatccgggaaacacaagctttaatactt
tcacctacacgagagctggctgtacaaattcagaaagttattctggctttgggtgactac
atgagtgtccagtgccatgcctgcatcggtgggaccaatgttggtgaagacatccgaaaa
ctagactatggacaacatgtagtttctggaactccaggcagagtctttgatatgataaaa
agacgcaatctgcgcactagatccataaagatgttggtactggatgaggctgatgaaatg
ctcaagaaagggttcaaggaacagatctatgatgtgtacagatacctaccacctgccaca
caagttgttttaatctctgctacacttcctcatgaaatcctggaaatgaccaataaattt
atgactgatcccattcgaattttggtcaaacgtcgtgttttgataactacggatgtttgg
gccagaggaatagatgtccagcaagtctcactagttatcaattatgatctcccaaatagc
agagagttgtacattcacaggattggcagatcaggtcgttttggacgtaaaggtgttgca
atcaactttgttaagaatgatgatatcaggattctccgagacattgaacaatactacgca
acacagattgatgagatgcccatgaatgttgctgatttgatctga
DBGET
integrated database retrieval system
