Biomphalaria glabrata (bloodfluke planorb): 106058243
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Entry
106058243 CDS
T07368
Name
(RefSeq) exosome complex component RRP43-like isoform X1
KO
K12586
exosome complex component RRP43
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106058243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106058243
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106058243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106058243
NCBI-ProteinID:
XP_013071076
UniProt:
A0A2C9KUK4
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MPLFKTFKITQPKEYYEKFLEKDVRPDNRELGEFRPTVLNIGCVTTAEGSSLVKLGNTSV
ICGIKAEVAEPASDGKKGYLVPNVELPPLCSTNFKPGPPSELAQVLSQNMVDFLTDSKCV
RLEDLCIVPGKLVWSLNIDLVCLDFDGNVMDACTLALMAALKKTLLPVVTVDEDSGEITT
DVSIHQKLSISKCPVSTSFIIFDKKILLVDPTSEEEDLATGALTIITEGDNLCSIYKPGG
TPLTDTQMKTCLDRAFLRGREAERLIEELIDK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccacttttcaagacattcaagattacacaaccgaaagaatactatgaaaaatttctg
gagaaagacgtgagacctgacaacagagaacttggagaatttcgtccaactgttctaaat
ataggttgtgttacaactgctgaagggtcctcacttgtcaagcttgggaacacatctgtt
atatgtggcattaaggctgaagtagctgaaccagccagtgatggaaaaaaaggatactta
gttccaaacgtagagctacctcccttgtgtagtaccaactttaaacctggcccacccagt
gaattggctcaagtcttaagtcaaaatatggtcgactttttaacagattctaaatgtgtc
cgccttgaagacttgtgtattgtacctgggaagcttgtctggtcactcaatattgacctg
gtatgtctagactttgacggcaatgtcatggacgcctgtacgctagcattgatggcagct
ctgaaaaaaactttattgccagtggtgactgtggatgaagactcgggagagatcacaact
gacgtctccatccatcaaaagttgtccatctctaagtgtccagtctccacaagttttatt
atatttgacaaaaaaattctgttagttgatccaaccagtgaagaagaagacttagcaaca
ggggccttaactataatcacagaaggcgacaatttgtgcagcatttataaaccaggtgga
actcctctcacagacacacaaatgaaaacctgtttagacagagcattccttcgggggagg
gaagctgagaggttgattgaagaattaattgataaataa
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