Biomphalaria glabrata (bloodfluke planorb): 106058852
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Entry
106058852 CDS
T07368
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106058852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106058852
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106058852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ASA1
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_SCAP
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_DCAF12
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
eIF2A
PAC11
Beta-prop_SPT8
Beta-prop_WDR11_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
106058852
NCBI-ProteinID:
XP_013071817
UniProt:
A0A2C9JLF4
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MNGKPNRIWQRDRRDEHQIQPDALYAVDWSHSDGWMVTADHAGYIKYWQSNMNNVKMYQA
HKEPIRGISFCPSDTKFASCSDDGTVRIWDFMRCHEERILRGHGADVRCVDWHPQKALLA
SGSKDNQQPVKLWDPRTGNSLATLHAHKHTVMDLKWHMNGNWMLTASRDHLLKLFDIRNL
KEELQTFKGHKREATAIGWHPIHEGLFVSGSADGALMFWMVGCDHEVGAMEEAHEGMVWS
VAWHPLGHILASGSNDHATKFWTRNRPGDEMRDKYNLNTLPMGMMEQELLEYSQESTVPN
LPGMGLEHGLPEHLQVKDEKQEENDLPSIPGLDWEEDAALLKAEEKASQKKVPYARPVPK
MFEQAWTGEIDMEQLKKEQQQQQLKAQFMPPSQSSLLLAQQVIGAAIAGTLRQQLAASEG
GRMLLPGGPLMLGGPRMIIAPGQPVIGPRAGQMLLIPSGPGSGGRPLGPNSTQANTDLQT
SQQILATTMSIINSNLQAANALGQQVGNAIGQQVANSQINNNQPAGQINNQGQMRMPQGP
GQMHLRPQMSQGQNVGQRSQDNQNPTHNEGSQMNIRQTGSHFGQNQQNMNAEGMDKDERF
QGQAPMGDPNLEEMDHDYRHPVYNGPVAAEDEDYRMKGSNNRSMNDLRGGIDPRNQPNVE
ADYQEGDYGDTDERGLDTGDYDHRSYGQGRGGGIMHGRGNLHARGGNLPLRDNRGWDTYE
ETEYPDETWDGGDFGNYDENYDGYEDEYMEQEYGGDPRGRKRPWDEGPGLHRGMGPRGGA
HWGREMRSRGRPNFRNVRGMRPGAFRGPRGWIRGGERGRGGERGRGGHRGRGMDPGW
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtaaacctaacagaatttggcaacgtgataggagagatgagcatcaaattcag
ccagatgctttgtatgcagttgattggagtcacagtgatggctggatggtgacagctgac
cacgcaggctatatcaaatactggcaatccaatatgaacaatgtcaagatgtaccaggcg
cacaaggagcccattcgaggcatcagtttttgtccatccgacactaaatttgcatcgtgc
tcagatgatgggactgttcgaatatgggattttatgagatgtcacgaagaaagaattctc
cgaggtcatggagctgatgttcgatgtgttgactggcatccacaaaaagctctcttggct
tcaggcagtaaagataatcagcagcctgtcaagctttgggatcccagaactggaaatagc
ttagcaacattacatgctcacaaacacactgtgatggatctcaagtggcacatgaatggg
aactggatgttgactgcctcaagggatcatttattgaaactgtttgatattagaaattta
aaggaagagttacagaccttcaaagggcacaaaagggaggcaactgccattggatggcat
cctatccatgaagggctgtttgtaagtggcagtgctgatggggctctgatgttttggatg
gttggatgtgatcatgaagtgggagccatggaggaagctcatgaaggaatggtctggagt
gtagcctggcaccctcttggacacatcctagcttctgggtcgaatgaccatgcaacaaaa
ttttggacaagaaatcgaccaggagatgaaatgagagacaaatacaatctgaatacttta
ccgatgggaatgatggaacaggagttgttagaatacagtcaggaatctacagtacctaac
ctacctgggatggggctagaacatggactgcctgaacacttacaggttaaagatgaaaaa
caagaagagaatgatcttccgtcgattcctggtctagattgggaggaagatgctgcactg
cttaaagctgaggagaaagcatcccagaagaaggtgccttacgcaagacctgtgcccaag
atgtttgaacaagcttggacaggagagattgatatggaacagctgaagaaggaacagcaa
cagcagcaactgaaggctcagttcatgcctccgtctcagtccagcctgctcttagcccag
caggtcattggagctgccattgctggaacactgcgccagcagctagctgccagtgaaggt
ggccgcatgctactgccaggtgggccactgatgttgggaggtccaaggatgattattgcc
ccagggcagcccgttattggcccacgtgcaggacaaatgctgctaattcccagtgggcca
ggttcaggaggccgacctttgggtccaaatagcacacaagcaaatacagatctccaaact
agccagcagatactggccacgacaatgagtattattaacagtaatttgcaagcggctaat
gctttagggcaacaagttggcaatgcaatagggcaacaagttgctaattcacaaataaat
aacaatcagccagcaggtcagataaataaccaaggtcaaatgaggatgcctcaaggacct
ggtcaaatgcatttaaggcctcagatgtctcaaggacaaaatgtgggtcaaagatctcaa
gacaaccagaatccaacacacaatgaaggttcacaaatgaatattcgacaaacagggtca
cattttgggcagaaccagcaaaatatgaatgctgaaggtatggataaagatgaaaggttt
caaggccaagcgccaatgggagatccaaacctagaagagatggatcatgattatcgccat
ccagtatacaatggccctgtggctgcagaggatgaagactacagaatgaaaggaagcaat
aacagaagcatgaatgatttacgagggggcatcgaccccaggaaccaacccaacgtagaa
gcagactatcaggaaggggactacggggacactgacgaacgagggttagacacgggggat
tatgatcacaggagttatgggcagggtcgaggtggcgggattatgcacggccgaggaaac
ttgcatgctaggggaggtaacctgcccctgcgtgacaatagaggctgggatacgtatgag
gaaacagagtacccagatgaaacgtgggacggtggagactttgggaattacgacgagaat
tatgatggctatgaagatgagtacatggagcaggagtatggaggggaccctcgagggagg
aagaggccttgggatgagggcccaggtcttcacagaggaatgggcccaagaggtggggcc
cactggggaagggagatgcgaagcaggggacgaccaaattttcgaaatgtcagaggaatg
agaccaggggctttcagaggtccaagggggtggatccgaggtggggagagaggcagggga
ggtgagagaggtagaggcggtcacagaggtagggggatggatccaggctggtga
DBGET
integrated database retrieval system
