Biomphalaria glabrata (bloodfluke planorb): 106060295
Help
Entry
106060295 CDS
T07368
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106060295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106060295
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106060295
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
106060295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
106060295
NCBI-ProteinID:
XP_013073569
UniProt:
A0A2C9JMM9
A0A9U8E675
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MSVDIRLAKSRVVGLDVYHGDDPGNIVTPGDVITADTGFMRGHGTYMSEDCLHSSVAGMV
ERVNKLVSVRPLKTRYNGEIGDVVIGRIIEVSQKKWRVETHSRMDSILMLSSVNLPGGEL
RRRSEEDEKMMRNYLKEGDLISAEVQNVMSDGCLSLHTRSLKYGKLGQGTLVKVSPSLVL
RRKTHFHNLPVGASIILGNNGYIWICPTEHVEAGETGGYETNLQPVSRSEREAIARLRNC
VLALADQNVLLFDTSILYTFEASQKYAVKDILKPEVILEVVDLVQQRLELEGS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttgatattagacttgctaaatctcgtgttgttggtcttgatgtttatcatgga
gacgatcctggtaatattgttactcccggagacgtaataactgctgatactggatttatg
aggggccatggaacttacatgtcagaagattgtcttcattcttctgtggctggaatggtt
gaacgagtcaataaacttgtatcagttcgtccacttaaaacaagatacaatggagaaata
ggagatgtggttattgggcgaatcatagaagtctctcaaaagaaatggagagtagagact
cattctagaatggactcaatcttgatgttgtcctctgttaatttgcctggtggtgaactg
cgccgtcgctcagaagaagatgaaaaaatgatgagaaactatttgaaagaaggagatctg
attagtgcagaagttcagaatgtcatgtctgatggatgcctatctctacacactcgcagt
ttgaaatatggaaaattaggtcaaggcacattggtcaaagtctcaccttcacttgtcctg
cggcgaaaaacacatttccacaatttacctgttggggcatccatcattctgggcaacaac
ggctacatttggatttgtccaactgaacatgtagaagcaggggagacaggaggctatgaa
acaaatttacaaccagtatccaggtcagaaagagaagccattgccaggctgagaaactgt
gtcttagctttagctgatcagaatgttcttttgtttgatactagcatcttgtacacattt
gaagcctcacagaaatatgcagtgaaggacatattgaaacctgaagtgattctggaagta
gtggatcttgttcaacaaagacttgagctagaaggaagctga
DBGET
integrated database retrieval system
