Biomphalaria glabrata (bloodfluke planorb): 106061112
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Entry
106061112 CDS
T07368
Name
(RefSeq) exosome complex component RRP40-like
KO
K03681
exosome complex component RRP40
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106061112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106061112
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106061112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP40_S1
KH_6
RRP4_S1
Rrp40_N
S1
RRP40_N_mamm
Motif
Other DBs
NCBI-GeneID:
106061112
NCBI-ProteinID:
XP_013074629
UniProt:
A0A2C9JNF1
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MKVCVGQVTLPGDEFDMSPLESNKKIVVGPGLAEFEGMIKIIKPGILRYREPATYWIDSH
QKRYVANKGDLVVGIVTQKVGDIFRVDIGSSEQASLSYLSFEGATKRNRPDVKIGDIVYA
NVLVANKDMEPELVCIDSDGHSNGLGVIRSGGFLFQSSLHLVRKLLNPNCVLQKTLGKTF
EFETAIGMNGRIWVRAQSDIQTITMANAILASEHMNNVQIETMCKKLCKVASKMD
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgtgtgttggacaagttactttgccaggggatgagtttgatatgtcaccattg
gaaagcaacaaaaaaatagttgtaggtcctggattggcagaatttgaaggaatgataaaa
ataataaagcctggaatacttcggtatcgtgaacctgcaacctattggattgattctcac
cagaaaaggtatgttgctaacaaaggagatctggtagttggtatagtgacacaaaaagtg
ggggatatttttcgtgttgatattggtagcagtgaacaagctagtttgtcttatttatca
tttgaaggggccacgaaaagaaatcgacctgatgtcaagataggagacatagtctatgcc
aatgtattagttgccaacaaagatatggagccagagctagtttgtattgacagtgatggt
catagtaatgggttaggtgtaatacgaagtggtggttttttgtttcagtcttctctacat
ttagtgcgaaagttgctaaaccccaattgtgttttacaaaaaactcttggaaaaacattt
gaatttgagactgctattggtatgaatggaagaatttgggttcgagcccaaagtgacata
cagacaataactatggccaatgcaatccttgcttcggaacatatgaacaatgtacaaatt
gagacgatgtgcaaaaagctgtgtaaagttgcttctaaaatggattga
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