Biomphalaria glabrata (bloodfluke planorb): 106061139
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Entry
106061139 CDS
T07368
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106061139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgt03021
]
106061139
03041 Spliceosome [BR:
bgt03041
]
106061139
03036 Chromosome and associated proteins [BR:
bgt03036
]
106061139
Transcription machinery [BR:
bgt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
106061139
Spliceosome [BR:
bgt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106061139
Complex B
106061139
Complex C
U2 SnRNP specific factors
106061139
Chromosome and associated proteins [BR:
bgt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
106061139
TFTC complex
106061139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
106061139
NCBI-ProteinID:
XP_013074665
UniProt:
A0A2C9JNG1
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MYLYNLTLQRSQGIVTAIHGNFSGSKLQEIVVSRGKVLELFRHDPNTGKIFPVLSTEVFG
IIRSLMPFRLTGGTKDYVVAGSDSGRIVILEYIPAKNMFERIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMIGAVEKQKLVYILNRDAQARLTISSPLEAHKSNTLVYHMVGVDVGFENP
SFACLEIDYEEADGDPTGEAALKTQQLLTYYELDLGLNHVVRKYSEQLEEHANFLISVPG
GHDGPSGVLICSENYITYKNLGDQPDIRCPIPRRRCDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVATSMCVLKSGFLFVAAEFGNHHLYQ
IAHLGDDDGERMFSSANPLEEGDTFHFSPRELKNLVMVDEMDSLSPIITAQIADLANEDT
PQLFTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKHTDGRFLGLITPGPIS
HIFITFGWWLSMIFYSHYSAFFVEFSLLLLTGGIVLGSSAYVLISRKTKIYIFILALFQI
YPEGIRHIRSDKRVNEWKTPGKKNIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTE
RKELSSNVVCMALGRVPAGELRSRFLAVGLSDNTVRIISLDPNDCLSPLSMQAFPAPPES
LCIIEMGGSEAKEETGETATTGGIYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPV
KLFRISMQGSEAVLAMSSRTWLSYTYQSRFHLTPLSYETLEYASGFASEQCPEGIVAIST
NTLRILALEKLGAVFNQVAWPLQYTPRKFVIHPESNNLIIIETDHNAYTEETKQLRKQHM
AEELIEAADEDERELAAEMAAQFLNEDRPETIFGAPKAGLGMWASVVRIINPITGENLEK
IALEQNEAAHSVALVKFSNRPEDTILIVGIAKDLVLNPRSVTGGELLTYQVTESGTKLEL
LHKTPVEEVPGAITPFQGRVLIGVGKYLRIYDLGKKKLLRKCENKHIPNAIVSIHTMGNR
VFVGDVQESIHFVRYRRPENQLIIFCDDTNPRWVTCSCILDYNTVAIADKFGNATVIRLP
SEVSDDVDEDPTGNKALWDRGLLNGASQKADVIANFHVGEVVTSLQKATLIPGGSESLTM
LWNVIDGDLCEVFNSMEPSKQKSIAEELEDRSSNEVSKKLEDIRTRYAF
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgtacaatctgacactgcagaggtcacagggcattgttacagcaatccatggc
aacttttctggctccaagcttcaagagatagttgtttctcgtggaaaagttttagaattg
tttcgccatgatccaaatactggcaagatatttcctgtattgtccacagaagtttttgga
atcattcgctctttgatgccctttcgactgactggtgggactaaagattatgttgttgct
ggttctgactcgggtagaattgttattctagaatacatcccagctaaaaacatgtttgaa
aggatccaccaagaaacatttggtaaaagtggttgcagaaggatagttcctgggcagtat
ctagctgttgatcctaaaggaagagctgttatgattggtgctgttgagaagcagaaactt
gtctacattttgaatcgagatgctcaggccaggttaacaatttcatctccactagaagct
cacaaatctaacaccttagtttatcatatggttggtgtagatgtaggctttgaaaatcca
tcatttgcatgtttggaaatagattatgaggaagcagatggtgatcccactggggaagct
gcactcaagacacaacagctgctaacatattatgaactagatttaggtcttaaccatgtg
gtgcgcaagtattcagaacagctagaggaacatgccaactttctcatttcagttccaggt
ggtcatgatggacccagtggtgttcttatttgctcagaaaactacattacttacaaaaac
ttgggtgaccagccagatatcagatgtcctattccacgaagaaggtgtgatctggatgat
cctgagcgtggaatgatttttgtttgtagtgctactcataaaaccaagtccatgttcttc
ttccttgcacaaactgaacaaggagacatatttaaaataacactggaaactgatgaagac
atggtaacagaaattcgactcaagtattttgatacagtgcctgtggctactagtatgtgt
gtattaaaatctgggtttttatttgttgctgctgaatttggtaaccatcacttgtatcaa
atcgcccatttgggagatgatgatggtgaaagaatgtttagcagtgctaatccccttgaa
gagggggatactttccatttttctcctagagaattgaaaaatttagtgatggtggatgaa
atggatagtttatcaccaatcattacagctcagatcgctgatttagctaatgaagatacc
cctcaactatttacattgtgtggacgaggcccaaggtccaccctgcgtgtactccgacat
ggtttggaggtgtcagagatggcagtgtcagagcttcctggtaacccaaatgctgtatgg
acagtgaagaaacacacagacggtaggtttctagggttaattacacctggtcccatttct
cacatattcatcacatttggatggtggctttccatgatattttattcacattattctgcc
ttctttgtagagttttctttgcttttgttgactggaggaatagttttaggttcctctgca
tatgttctcatctccaggaaaactaaaatttatatatttatacttgctttgttccagatt
tatccagaaggtatcagacatattcgttctgataaaagagttaatgaatggaaaactcct
ggtaagaaaaatatagtgaaatgtgctgtcaaccaaagacaagtggtcattgcattgaca
ggtggagaattggtctactttgagatggatccaactggtcagctgaatgagtatacagaa
aggaaggagctgtccagtaatgttgtatgtatggcactggggcgtgtacctgctggagaa
ctcaggtccaggtttttagcagttgggttgtcagataacacagtcagaatcatttccctt
gatcccaatgattgcttgtcaccattaagtatgcaggctttccctgctcctcctgaatct
ttatgtataattgagatgggtggcagtgaggccaaagaggagactggtgaaacagctact
acaggtggaatctatttgaacattggcttacagaatggtgtcttgttgagaactgttcta
gatccagtgactggagatttgtctgatacaagaacaagatatcttggctctagacctgtc
aagctttttagaatttcaatgcagggttctgaagctgttcttgcaatgtccagtagaaca
tggctgagttacacttatcaaagcaggttccacttaactcctttgtcatatgaaacctta
gaatatgcgtctggctttgcttcagaacaatgtcctgagggtattgtggctatttcaaca
aatactttaagaattttggccttggagaaattgggtgctgttttcaaccaagttgcttgg
cctttacagtacacaccccgcaaatttgttatacatccagaatccaacaatttaatcatt
attgaaacggaccataatgcttatactgaagagaccaaacagttgagaaaacaacacatg
gctgaggaattgatagaagcagcggatgaggatgaacgagagctagctgctgagatggct
gcacagtttctaaatgaggaccgtcctgaaacaatatttggtgctcccaaagctggtctt
ggtatgtgggcctcagttgtcaggataattaaccctatcactggtgaaaatttggaaaaa
attgctttggagcagaatgaagccgcacacagtgttgctttggtcaagttttccaacaga
cctgaggataccattctcatagttggcattgctaaagatctagttcttaatcctcgctct
gtcactgggggagaacttttaacatatcaggtcacagaaagtggtactaaacttgagctg
ctacataaaacaccagttgaggaagttcctggagctattactcctttccaaggtcgagta
ctaataggagttggcaaatatttgaggatttatgatctaggaaaaaagaaattgttgcgg
aagtgtgaaaataagcatattccaaatgctatagtcagtatccacacaatgggcaacaga
gtgtttgttggggatgttcaagaaagcattcactttgtccgttatcgcaggccagaaaat
cagttaattatcttctgtgatgatacaaatcctcgctgggttacttgctcttgtatattg
gattacaatactgttgccattgcagacaaatttggaaatgcaacagtgatacgtctaccc
tctgaagtaagtgatgatgttgatgaagatccaactggtaacaaagcattgtgggacagg
ggtcttctaaatggagcttctcaaaaggctgatgtgattgctaatttccatgtgggtgaa
gtagtgacatcattacagaaagctacacttattcctggaggctcagaatctttaacaatg
ttgtggaatgttattgatggtgatttgtgtgaagtattcaattccatggaacccagcaaa
caaaaatcaatagctgaagaattagaagacagaagctctaatgaggtgtcaaagaaattg
gaagacatcagaacaagatatgctttctaa
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integrated database retrieval system
