Biomphalaria glabrata (bloodfluke planorb): 106061218
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Entry
106061218 CDS
T07368
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgt03041
]
106061218
Enzymes [BR:
bgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106061218
Spliceosome [BR:
bgt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106061218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
KH_1
Helicase_C
KH_2
MOEP19
KH-I_KHDC4-BBP
KH_5
KH_Vigilin
ResIII
KH_KhpA-B
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106061218
NCBI-ProteinID:
XP_013074750
UniProt:
A0A9U8E625
A0A2C9L7A0
LinkDB
All DBs
AA seq
752 aa
AA seq
DB search
MSYSASRGGGGGNSTTMMVESSNVGKIIGRGGSRIRDLEQDSNARIKISRDENEDGMKSV
EISGTEEEVENARRMIEECLNGGDSGGGGRRGGYGGGRGGRGGSGGGYGRRDEGWGRRDR
DSGDGWGRRDDYDRGSRGGSGRGGGGGFGGSSGGESETIYVESSEVGRIIGRGGSRIRDM
EADSGCRIKVSRDGDSAGHSSVELSGSKSAISEAKRLIQDAGVEIVNGNERGRGWPDYKV
GGFGTDSSGTLFEVNTSEKQREQEEIKKPAPIDWNAVRDQENLRLNSRFEDLPPIVKNFF
KENKNFPKMSEDEVKRFRKENNNITFEAPDFETVPHPVRSFEEIFGDYPEILSEIQKQKF
VKPSPIQSQAWPVLLQGKDLIGIAQTGTGKTLAFLLPALIHIDNQPVPRNERVGPSALIL
SPTRELAQQIEMEINKINYKGIRSICVYGGGDRREQLNKIKKGVEIVVATPGRLNDFMNC
GAVNVKHVTYLVMDEADRMLDLGFEIEIKKVMLDIRPDRQTVMTSATWPPDVQRLADQYL
TNPIKVFVGTLDLAAVHSVKQYVELVDEADKKMLLLTFINNMQKNDKAIVFVGKKIIADD
VSSDLAMKNITCQCIHGDREQCDREAALEEFKDGSVRILVATDVASRGLDVKDITHVVNY
DFPSHIEEYVHRIGRTGRAGRSGIALTFVTRNDWKNARQLINILTEAGQDVPDDLVSMAE
RFAAFKLRTEEEFERGGFSRRGGRNREKNSWM
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatagtgcaagtagaggtggtggtggtggcaactccacaactatgatggtagaa
tcttctaacgttggaaagattataggtcgtggtggaagcagaatcagagatttggaacag
gacagtaatgccaggataaagatatcaagagatgaaaatgaagatggcatgaaatctgta
gaaatcagtggaacagaggaagaagttgaaaatgccagaagaatgattgaggagtgtttg
aatggaggtgatagtggagggggtggaagacgaggcggttatggaggaggacgtggtgga
cgtggcggaagcggtggtggatacggaagacgagatgaaggatggggtcgcagagataga
gatagtggagatggttggggaagacgagatgattatgacagaggtagccgtggaggctct
ggtagaggtggtggtggtggttttggtggcagtagcggtggtgaatctgaaacaatatat
gtggaatcatcagaagttggcagaattataggccgtggtggaagtcggatcagagatatg
gaagctgatagtggttgcaggataaaggtatctcgtgatggagattcagcaggacacagt
tcagtagaattgtctggtagcaaaagtgccatctcagaagctaagagacttatccaagat
gccggagttgaaatagttaatggcaacgaacgcggccgtggttggccagattataaagta
ggtggttttgggacagatagttcgggcactttgtttgaagtgaacacctctgagaagcag
agagaacaagaggaaatcaagaaacctgctccaatagactggaatgcagttcgtgatcaa
gaaaacttgcgattaaatagtagatttgaagatttacctcctattgttaaaaatttcttt
aaggaaaataaaaactttccaaaaatgtcagaggatgaggttaaacgcttcaggaaagaa
aataacaacataacatttgaagctccagactttgagacagttcctcatcctgtacggtct
tttgaagaaatctttggggattatcctgagatactgtcagagatacagaaacaaaaattt
gttaaaccctcaccaattcagagtcaggcatggcctgtacttctacaaggcaaagatctt
ataggaatagctcagactggcactgggaaaacactggcttttcttttaccagctttgatt
cacattgataatcaaccagttccacgcaatgaacgggttggtccatcagccttgatactg
tctcctaccagagaacttgctcaacagattgagatggaaattaataaaatcaattataaa
ggaataaggagcatctgtgtctatggtggaggtgatcgcagagagcagttaaataaaatc
aagaaaggtgttgaaatagtggtggccactcctgggcggttgaacgactttatgaattgt
ggtgccgttaatgttaaacatgtcacatatttagttatggatgaagcggatcgcatgcta
gatttaggctttgagatagagatcaagaaagtgatgttagacatcagaccagacagacaa
actgttatgacaagcgctacatggccaccagatgtccagagactagctgatcagtatcta
actaacccaatcaaagtatttgtgggtactttagatctagctgctgtacacagtgtcaag
caatatgtagagcttgtagatgaagctgacaagaaaatgttgcttttgacattcataaat
aatatgcagaaaaatgacaaagccattgtttttgttggcaaaaaaattattgctgacgat
gtgtccagtgacttggccatgaagaacattacttgtcagtgtatacatggagacagagaa
caatgtgatcgtgaagcagcattagaagagtttaaggatggatcagtccgtattcttgtt
gctacagatgttgcctccagaggcctggatgttaaagatataacccatgttgtcaattat
gatttcccaagtcacattgaagaatatgtacatcgcattggaagaactggacgtgctggt
cgttcaggtatagccttgacatttgtaactcgtaatgattggaagaatgctcggcaactt
atcaatattttaactgaagctggtcaagatgttccagatgatttggtctcaatggcagaa
agatttgctgcattcaaactaaggacagaggaagaatttgagaggggtggtttctctaga
agaggtgggagaaacagagaaaaaaacagttggatgtaa
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