Biomphalaria glabrata (bloodfluke planorb): 106062047
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Entry
106062047 CDS
T07368
Name
(RefSeq) uncharacterized protein LOC106062047 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106062047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgt03000
]
106062047
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106062047
04121 Ubiquitin system [BR:
bgt04121
]
106062047
Enzymes [BR:
bgt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106062047
Transcription factors [BR:
bgt03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
106062047
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106062047
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106062047
Ubiquitin system [BR:
bgt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106062047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Torus
zf-UDP
Vasculin
Nup35_RRM_2
Baculo_IE-1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106062047
NCBI-ProteinID:
XP_013075756
UniProt:
A0A9U8E7J9
A0A2C9JPB9
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MSEEPAECPLCMEALEIDDHSFFPCTCGYQICRFCWHRIRTDENGLCPACRKQYPEDPAE
FKPLTEDELQNIKKERKQKDVQRKQKAAENRKHLANVRVVQRNLVFVVGLSPRLADPEVL
KKHEYFGKFGKIHKVVINQSTSYAGSQGPSASAYVTYVKPEDALRAILTVNNVHVEGRTL
KTSLGTTKYCSHFLKGSHCQKNDCMYLHELGEEAASFTKDEMQAGKHQEYEQMLIEQFLN
AQNSANNHHIANNKIKKSVSPQAIENAEVIPSLMDMTGDIKHTLSNAGPLLPNPVHNHTG
GGAANGHAHFNNSNSVWPVLDGASSPAHVNGTKNDHTSNNVSRAQGVGSKLQHRTNTPPG
SGGGSSASRAVGNGRQRGSNSLNSSEENHIQNQINVGSGNRSPTSTPPGDVEKNSPNDQV
NHRGLPLPTPSTSQPVSPRAGGSITTSQMTTPNSNTVPIISTQLQQQQHADLSSTVGAIG
SNRRPGLQEGNSAQGLSFFEMPNVSLVNHEMADTLPVSTSTDWVEAFGLKNKELPPEDDL
GFDPCAESFKGLADLIEKENGMQQQQHLHLLQSAHSRLGSPPQTSYPPHPLSQSPLQNNT
LLRSLPPGFSISHIQQQQLQQQHYFRPDISNSKMPDILPQFSLNAQRFAPLHYHSMPLDL
HTPQHQHQPQRELYNMKDMQEQLRSMLPNINISFGSIPHQQQQQQQAQQHQLQQVPTSLF
SQQSQHLNKSWPLSSSPDSSPWNDPAIVSTSQLTESGSLFPETSAPHWLKSLQHLTESDG
PSHRLPFVQQFPLGGNGGWPPHTHNPPPGFRAAGLGSQANTDTHQMAEVLQ
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagagccggctgaatgtcccttgtgcatggaagcacttgagattgacgatcac
agcttttttccatgtacatgtgggtatcagatttgtcgtttttgctggcatagaattcgt
acagatgaaaatggtttatgtccagcttgtaggaagcaatatccagaagaccctgcagag
tttaaacctttaacagaggatgaattacaaaacatcaagaaagagagaaaacaaaaagat
gttcaacgaaaacaaaaggctgcagaaaacagaaagcacttagccaatgtcagggttgta
cagagaaacctggtgtttgttgtaggtctgtctcctcgcttagctgatcctgaagtgctc
aaaaaacatgaatatttcggcaagtttgggaagatacataaagtggtgataaatcagagc
acttcatatgctggctctcagggtccaagtgcaagtgcctatgttacttatgtaaaacct
gaagatgctctcagagcaattttaacagtaaataatgttcatgtggagggacggacatta
aaaacatcactaggcactacgaaatattgcagtcattttttaaaaggctcacactgtcag
aagaatgattgtatgtacttacatgagcttggggaagaggctgccagctttactaaagat
gaaatgcaagctggaaaacatcaagagtatgaacaaatgctaatagaacagtttttaaat
gctcagaattcagcaaataaccatcatatagcaaataacaagataaaaaagtctgtatca
cctcaagcaatagagaatgcagaggttataccatctttgatggatatgactggtgatatc
aaacatacattatccaacgctgggcctttattacctaatcctgttcataatcatactggt
ggtggggcagctaatgggcatgctcactttaataattcaaattctgtttggcctgtgtta
gatggagccagttcgcctgcacatgtaaatggaacaaaaaatgaccacacatcaaataat
gttagtagagcacagggtgtgggcagtaaacttcaacacagaactaacaccccaccgggc
agtgggggaggtagtagtgctagccgtgctgttggtaatgggcgtcagagaggcagtaac
tctcttaacagttctgaggaaaatcatatacaaaatcaaataaatgtaggaagtggcaat
agatctccaacctctacaccacctggagatgttgaaaagaattcaccgaatgatcaggtc
aatcacagaggtcttccacttcccacacccagcaccagtcagccagtatcccccagagca
ggaggctcaattacaacttcacagatgaccacgccaaattcaaatacagtaccaatcatc
agtacacaattgcagcaacagcaacatgctgacttgagctcaacagttggtgctattggt
tcaaatcgcaggcctggtttgcaagaaggcaacagtgcccaaggtctttcattttttgaa
atgcccaatgtgtcactagttaatcatgaaatggctgatacactccctgtgtcaacctca
actgattgggtagaagcatttggtttgaaaaataaggaattaccaccagaagatgactta
ggttttgacccttgtgcagaatcatttaagggcttggcagatttgatagaaaaggaaaat
ggaatgcagcaacagcagcatcttcatcttttacaatcagcacacagccgtcttggatct
ccaccccaaaccagctatcccccccaccctttgtctcagtcacccttacaaaacaatact
ctactccggagtcttcctccaggcttctccatctctcacatacaacagcaacaactgcaa
cagcagcattatttccgacctgatatatcaaattccaaaatgccagacattctgccccag
ttttctctaaatgcacagagatttgctcctttacattatcatagtatgcctttagacttg
cataccccacagcaccaacatcaacctcagagagagttgtataatatgaaagacatgcaa
gaacagctgcgctctatgctgcccaatataaacatcagctttggttctattccccaccag
cagcagcaacaacaacaagctcagcaacaccagctacagcaggttcctacctcactattt
tcacaacagagtcagcatttaaataaaagttggccactgtcaagctccccagactcatct
ccatggaatgatcctgcaattgtaagcaccagccaattgactgaatctggaagtcttttc
ccagagacaagtgctcctcattggctcaaatctttacagcacctgacagagtctgatggc
ccaagtcacagattgccctttgtgcaacagtttccacttggtgggaatggaggatggccc
cctcacacccacaatcctcctccaggctttagagcagcaggcctgggcagtcaagctaac
acagacactcaccaaatggcagaggttcttcaataa
DBGET
integrated database retrieval system
