Biomphalaria glabrata (bloodfluke planorb): 106062669
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Entry
106062669 CDS
T07368
Name
(RefSeq) exosome complex exonuclease RRP42-like
KO
K12589
exosome complex component RRP42
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106062669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106062669
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106062669
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
106062669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH_C
RNase_PH
DUF6241
Motif
Other DBs
NCBI-GeneID:
106062669
NCBI-ProteinID:
XP_013076420
UniProt:
A0A2C9M0T8
LinkDB
All DBs
Position
Unknown
AA seq
181 aa
AA seq
DB search
MLTRSYSCFSAIDYTSLCLLPGQQCWLLYIDILLLECGGNLFDAVSIAVKAALFNLRIPN
VTMTKDEGGIELDVSDDPFDFKRLDVSGAPVIVTVNKIGHQHVVDASEKEEACSLAKVML
GITEKGTVTAMKKEGSGSLDSESISEMIESAKNVGIELNKCLLNILKEEEAKIEEPVGFL
R
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgttgacacgctcctacagttgcttcagtgccatcgattacacttccctgtgtttactt
cctgggcagcagtgttggttactctacattgatatacttctactagaatgtggaggaaat
ttatttgatgctgtttctatagcagtgaaggcagcacttttcaatctcaggattcctaat
gtcacaatgacaaaagatgaaggtggcatagaactggatgtttcagatgacccctttgac
tttaaaagattagacgtcagtggtgcaccagttatcgtcacagttaacaagataggtcac
caacatgttgtagatgctagtgaaaaggaggaagcctgcagtttagctaaagtcatgctg
ggcattacagagaagggaactgttactgcaatgaaaaaagaagggtctggaagtttagat
tctgagagcatttcagaaatgattgagagtgccaaaaacgttgggattgaactcaataaa
tgcttgctaaacattttaaaagaggaggaggctaagattgaggaaccagttggattttta
agataa
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