Biomphalaria glabrata (bloodfluke planorb): 106063188
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Entry
106063188 CDS
T07368
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106063188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106063188
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106063188
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106063188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106063188
NCBI-ProteinID:
XP_013076950
UniProt:
A0A2C9JHP4
LinkDB
All DBs
AA seq
729 aa
AA seq
DB search
MADRRKLQGEIDRCLKKVDEGVETFEDIWKKVQAATNSNQKEKFETDLKKEIKKLQRLRD
QIKSWIANSDIKDKSSLLDHRKLIETQMERFKVVERETKTKAYSKDGLGAAAKLDPQTKE
KAETTQWISNVIESLNLQLDQFESELEAKGSSSKKKGKVGEDPRIDQLKQQQEKHKLHIE
TLEKIMRQVDNDKLAVEKIRDLRDDIEYYVESNQDPNFQENLYIYDDLDLEDIAPDVTAV
ASSPTEGDEFADKIMSTPSSTNSSSPSPSPSVNANHSNEKHDDVDRKRHKSQSEEKSASP
APSGTSKPPSLVKQHSQNNTNAQNSESNSVNSNHHPSTTPSPLTAYAVAAGGQQNSATGS
RFSHPNPPSVWQRSLTAQTSFPSDTSKPYVNSVDHGSTGNLTSSVTSSSSTNTNSVSMTS
SGNPSVPSAPSPQTVAVVAAPSLSTVNSLASSSINNSSQVHNSRTDSTPVMNGPISANGP
TSQKIKNDELSLRTMAQQAVANAELEKTLPSTHAPVESSTVYNNSSQAPSQTLASLSEQC
SVLSEQQLSSQLPQQQQIVQAPSTNTIHLNPLLGMAPLGPVQLAKEQHYQSAMVDAAYHH
LPHPSDSERMRHFLPRNPCPTASYYPSTASPHADTVEFYQRCGTETLFFIFYYMEGTKAQ
YLAAKALKKQSWRFHTKYMMWFQRHEEPKQITEEFEQGTYIYFDYEKWGQKKKEGFTFEY
RYLEDRDLN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaggcgaaagcttcaaggtgagatagatagatgtttaaagaaagtagatgaa
ggtgtggaaacctttgaggatatatggaagaaggttcaagctgctacaaatagtaatcaa
aaagagaaatttgaaactgatcttaaaaaagagattaaaaaactccagaggttgagagat
cagatcaaatcatggattgccaacagcgatataaaagacaaatcttcgcttttagatcac
cgcaaattaatcgagacgcaaatggaacgttttaaagtggtagaacgagagacaaaaacc
aaagcctattcaaaagacggtctaggagctgctgcaaaactagatcctcagacaaaagaa
aaggcagaaaccacacaatggatatcgaatgtgatagaaagtctcaatttgcagctggat
cagtttgagagtgaactagaagcaaaaggttcttcaagtaagaagaaagggaaagtgggg
gaagaccccagaatagatcaattaaaacaacaacaagaaaagcataagcttcatatagag
acattagaaaaaataatgagacaagttgataatgacaagttagcagttgaaaagattcga
gatttgcgagatgatatagagtattatgtggaatctaatcaagatcctaactttcaagaa
aatctttatatttatgatgatttagatctggaagatattgcacctgatgttactgcagtg
gcatcatcacccacagaaggtgatgagttcgctgataaaattatgagtacgccgtcatca
accaattcaagttctccttctcctagtcccagtgtaaatgccaatcattccaatgaaaag
catgatgatgtggatagaaaaagacataaatctcagtcggaagaaaaaagtgcatcacct
gctccttcaggaacctcgaaaccgccatctttggtgaaacaacattcacaaaacaatact
aatgcacaaaattcagaaagcaactctgtgaatagtaatcatcatccatcgacaacaccg
tcacctttaacagcctatgctgtggctgcaggcgggcagcaaaacagcgcgacaggttct
cgattttctcaccccaacccaccctctgtgtggcagcgtagtttaactgcccaaactagc
tttcctagtgatacatccaaaccctatgtgaattcagttgatcatggttcaacaggaaac
ttgacaagcagtgttacatcttcaagttctacgaatactaattctgtctctatgacatca
tcgggaaatccgtctgtgccctctgccccatcaccacagacagtggctgttgttgctgca
ccatctcttagtaccgtgaactcattggcttcatcaagtattaacaattcctctcaggtc
cataatagtcggacagacagtacgcctgttatgaatggaccaattagtgcaaatggtccg
acgtcacaaaaaattaagaatgatgaattatcgttgcgaacaatggcccagcaagcagtt
gccaatgctgaattggaaaaaacattgccttcaactcatgcgcctgtcgaatcttctact
gtgtacaataattcatctcaagctccttcacaaaccttagcttccttatctgagcagtgt
tctgtcttgtcagaacagcagctttcttctcagctgccacaacagcaacagattgtgcaa
gcgccatcgacaaacactatacatttgaaccctttgttaggcatggctccgctaggtcca
gttcaactggccaaagagcagcactaccagtcagcaatggttgatgcagcttaccaccac
cttccacatccttctgattctgaaagaatgagacacttcttgccacgcaatccatgtccg
acggcatcatactatccgtcaactgcatctcctcatgcagatactgttgagttttatcag
cggtgtggtacagaaacacttttcttcatattttactatatggagggaacaaaggctcaa
tatttggcagcaaaagcgttgaagaaacagtcctggaggtttcatacaaaatacatgatg
tggtttcagcggcatgaagagcctaaacaaattacagaagaatttgagcagggcacatac
atctactttgactatgaaaaatggggccaaaagaagaaagagggttttacatttgaatac
agatatttggaagatagagacttgaactag
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