Biomphalaria glabrata (bloodfluke planorb): 106064010
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Entry
106064010 CDS
T07368
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106064010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgt03041
]
106064010
Spliceosome [BR:
bgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106064010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_Vps41
Ge1_WD40
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Vma22_CCDC115
DUF6686
Motif
Other DBs
NCBI-GeneID:
106064010
NCBI-ProteinID:
XP_013077953
UniProt:
A0A2C9JQQ6
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MSDDEGVLSVPKKQKIIHYGSLEATEKSSAGDKGSSTNSAIEAGKEAGHINITDGSHFDL
EASETAMQLEALAEFEKRKRARTIQVSTDDSEIRANLRQLGEPICLFGEGPAERRERLRK
LLAELGQSALKKKKEEKLKELKKKEEDNITWYHEGPTSLREARYWIAQYSIPRAKKRVQE
QKMEKNLPLTQKHAEIQLLQKRIRSVSNDSSQIGDSRPISYCCFSPNSKMLATASWSGLC
KLWSIPDCSLIRTLRGHNSNVGAIVFHPEATLTLDNSLCCMASCAQDGSVKLWNLESDEP
IADIEGHAPYRVSRVKYHPSGRFLATCCHDNSWRLWDLEVQEEVLHQEGHSAPVYDIAFQ
QDGALSVTGGLDAYGRVWDLRSGRCIMFLEGHLKPVVAVDFSGDGYHVATGSEDNSTKIW
DLRQRKCVYTVPSHTNIVSVVRFQPHHGNYLVTASYDCTAKIWAHPTWAALKTLAGHESR
IMGLDISNDLKYMATSSYDRTFKLWVSELGGGL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaaggggtactctcagtgcctaagaagcagaaaattatccactatgga
agtttggaagccacagaaaaaagttctgctggagataaaggaagtagcacaaatagtgcc
attgaagctgggaaagaagctggtcatataaacatcacagatggcagtcattttgatctt
gaagccagtgaaacagccatgcagttggaagctttagctgagtttgagaaaagaaaaaga
gcaaggaccatccaagtgtcaacagatgattcagaaatcagagccaatctcagacagtta
ggagaacccatttgtttatttggtgagggtccagcggagagaagagaacgtctaaggaaa
ctcttagcagaactaggtcagagtgctctcaagaagaaaaaggaagaaaagttgaaagag
ctgaagaagaaagaggaggacaatatcacctggtaccatgaaggcccaaccagcttaaga
gaagcaagatattggatagcacagtactctatacccagggctaaaaaaagagtgcaagag
cagaaaatggagaagaatcttccgttgacccagaaacatgctgagatacaactcttgcag
aaacgaatcagatcagtgagcaatgacagcagccagataggtgacagtcgaccaatctca
tattgttgtttcagtccaaattctaaaatgttagctacagcatcgtggtcaggtttgtgc
aagctgtggtctataccagactgtagtttaatcaggacactcagaggtcacaacagtaat
gtgggtgccattgtgtttcatccggaggccactctgacattggacaacagcctgtgctgt
atggcttcctgtgctcaggatggttctgtcaaactttggaatctagaaagtgatgagccc
atagctgatatcgaaggtcatgccccatacagagtgtccagagtcaagtatcatccgtct
gggcgatttctggccacctgttgtcatgataattcctggagactctgggacttggaggta
caagaggaagtcttacatcaggaaggtcacagcgcacccgtgtatgacatcgctttccag
caagatggagccctctcagtaactggtggtttagatgcttacggcagagtgtgggatttg
aggtcaggtcgctgtatcatgtttttggaaggtcacttgaaacctgtggtagcagtagat
ttcagtggcgatgggtatcatgttgccaccggaagtgaagacaactccaccaaaatctgg
gacctgcggcaaaggaagtgtgtttacaccgtcccatctcacacgaacattgtatctgtg
gtcagattccagccacaccatgggaactacttggtgacggcttcctatgactgtacagcc
aaaatttgggctcacccaacatgggctgccctcaaaactcttgccggccatgaaagtagg
attatgggccttgatatatctaatgacctcaagtacatggccaccagctcttatgacagg
accttcaagctgtgggtctcggaactaggaggagggctgtaa
DBGET
integrated database retrieval system
