Biomphalaria glabrata (bloodfluke planorb): 106064844
Help
Entry
106064844 CDS
T07368
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106064844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106064844
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106064844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
106064844
NCBI-ProteinID:
XP_013078922
UniProt:
A0A2C9KHI0
LinkDB
All DBs
Position
Unknown
AA seq
1604 aa
AA seq
DB search
MAGANAESFGNRQLWQTIGGAGYLTLRPNEYIEQELKNHRDKLSQGILFYKKQRSPSEEH
LNKRKVKSPQKEFVIRLSHLMGLDELQSHDLFCAYLFTEFRGSQKDIANILSHERHSETL
LLKIQEFYYSERLYLIRALRHLVYYLNKQHTYKDVFISFAKGLLDNNHLSKKVIAQFEEV
SSSPLPTKETHGPLMTRTQALSWALQNLKEQVELLELLVIYYSVVEMDVQTFLDLFARFK
KHNFGWGQNFKHLVDGQMDKLFKRIGHLELLILIEGLDLLAAASLKNATNLSPQSHIILS
DSNVIEKVDAVFSQLRSELIHGPLLLSWSILQYILGELNQNQDSAEGGETVRSSKAFSKS
RHYGNLALQLGVLDYLLDLLQSEAFIGKSDLATTAQYIVYTVIASLLNMFHEDSLGNTEI
LYIIVSKLLSCDFIAEIFWDRPESEGVFNLYQSAKSRFPADFSSFIQFNISLASTGDKSA
VKVKSELSLCNLYTELLENSRSQDLVPTSQKGVFTLGRNKYPFPNSDFMIASGCEGYVSA
QSSSGDISTDCQLIRWEATYNGWHYLLGEIQELLRQVSHGADFKIIISPNLPKGMVVGRY
SSKQGTEHEHLASVLFLLREVFPRYNKWRFVDHDQYKCIGQKCLQLFHGIFNFANILEHQ
KELKQHQPSVQEACVYSLLFTDAGRALLEIISIGVDNIQSAIAQQASLLKGLGVDMVELI
QIALSLLNLLLLLKPPNLGASPVEQALSSQPPGRQHQHLVATIAQYIFHRHNHRLPNLSV
LLLKRLAMVSPMSILACLGNEAESIRDMFLTRLQAVSEDIQLKVSILEFLSVCVDTQPGL
LELFLNVQQPEDKATEKTKPDLKVGRNSCLPILLDLMEVKKQCTYECPPELLCACLDLVH
SLWHGMRETPMTVLRDKDSFWPSVLAPLLKDLPVADKQAIKDCILTAAKETKALEAHHDQ
TVADLPALNLLLAWKSFLTTLTCCKVTDIKLSDKIKYTILLDLLHGINAQFESGDPTPVK
MKLASIASGLYFTLIKSWGKDISQCEGSQANKSASEDVVSSLTSAISGIRESTGVDMILP
SVHIGLLGAVTSILQQCGPKIIPQQCGPKIDNLPTLISDLLPVVCTVFLQSSWLLPSLVE
SNAASSANNSSEITTRSKQPESFNAHIKLQIVCCCLIVELLQQSSNLSSSLAVIQEHGIV
SSLLTTAEALMKAKQGISFIYTAFLLLIEIANTEMGANMLLNSNVTSHLCLVLTTCYSSE
DAFQPRNILSKAFTSSRSLTVTWHSLYCLSLDLFSVMLYVLGFSFLEDALNIVGVHQARM
QQSLLSVSMNMSKSVLQEAQATLNFIKQLCVYQKQWRFHLPNVMAKLMGALMDLVHSYVA
LMIRPRYLQLLLDHHKVQDSAGKAESLLQAPTYLQHQSSLDDVEQPTGKLVDAQNSMLKL
VGQCLFCLKYFTPSLPEVLCDQGIDVSDWEPILSLGFGTPSLDGDRNGLTFGTLINCVNV
CVRHLVKNDTKLSPHRSSPEDANSSQVSKNVVHLVLELSLDLLMSQACRYLRDPELAARD
CQFLKRELGTELNSCLSPLHRQLRRGADRSLSLTPPQHQSGLSP
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgccaacgctgaaagttttggcaacaggcagctgtggcagactattggtgga
gctggatacctgacactaagaccaaatgaatatattgaacaagaattaaaaaaccacaga
gataaattatcacaaggaattttattttacaaaaaacagagaagcccatctgaagaacac
ttgaataagaggaaagtaaaatcacctcaaaaggaatttgtcatcagattaagtcatctt
atgggacttgatgaacttcaaagtcatgacctgttctgtgcctatctatttactgaattc
agaggatcacaaaaggatattgctaacattctcagccatgaacgccactcagagacttta
ctgttgaaaattcaagagttttactacagtgagcgtctctatcttattagagctttgagg
cacttggtctattatctgaacaagcagcacacttataaggatgtcttcatttcatttgca
aaaggattgttggacaataaccatttgagcaaaaaggtgatagcccagtttgaggaagtc
agcagttctccattgccaaccaaagaaacacatggaccactgatgacaaggacacaggca
ttgagctgggcattacagaatctaaaggaacaagtggaacttttggagctgttggtcatc
tactacagtgtggttgagatggatgtccagacatttttagatctgtttgctagatttaag
aaacacaattttggttggggtcaaaacttcaaacatcttgtagatggtcaaatggacaag
cttttcaaaagaattggccatttggagttattgatacttattgagggcttagatctatta
gcagcagccagtctcaagaatgcaaccaacctgtctccacagtctcatatcattttgtct
gatagcaatgtaattgagaaagtggatgcagtcttttcacagttacgttcagagttaatc
catggacctctccttctgtcctggtctatcctacagtacatccttggggagctgaatcaa
aatcaggattctgccgaaggaggggaaactgtgaggtcatcaaaagccttcagcaagtca
cgtcattatggaaatttagcactgcagttaggggtgttagattatttactggatctctta
caatctgaggcattcattggtaaatcagatctagccacaacagcacagtatattgtgtat
acagtgatagctagtttattgaatatgttccatgaggactcacttggaaatacagagata
ctgtatataattgtttccaaacttctttcctgtgattttattgctgagatattttgggac
aggccagagtcagaaggagtgttcaatctgtaccagtcagccaagagcagatttcctgct
gatttcagctctttcattcagttcaatatttctctagcaagtactggagacaaatctgca
gtgaaggtgaaatctgaactctctttgtgtaacttgtacactgagctcctcgaaaacagc
agaagtcaagacttagttcctacttcacaaaaaggtgtttttacactagggagaaataaa
tatccttttccaaacagtgacttcatgatagcaagtggatgtgaaggatatgtgtcagcc
cagtcatccagtggcgacattagtacagattgtcagcttattagatgggaggctacatat
aacggatggcattatcttctaggagagattcaggaacttctgagacaagtgtctcatgga
gcagattttaagattattattagcccaaatctcccaaaggggatggtagtgggcaggtat
tcctccaagcagggaactgagcatgagcatctggctagtgtcttgtttctcctgagagaa
gttttccctcggtataataaatggcgttttgtggatcatgatcagtataaatgtattggt
caaaagtgtctccaattgtttcatggtattttcaattttgcaaacattctagaacatcag
aaagagctgaagcagcatcagccaagtgttcaggaagcctgtgtttacagtttattgttt
actgatgctgggcgagcgttgctagaaatcatatccattggagtggacaacatccagtca
gccattgctcagcaggctagtttgctgaaaggtcttggtgttgacatggtggaactcatc
cagattgccttatctctactcaacctattgttgcttctcaaacctcccaatcttggtgct
tctcctgtggagcaggctctgtcttctcaaccccctggccgtcagcaccagcatctggtg
gccaccatagcccagtacatctttcatcgtcacaatcacagattacccaatttgtcagtt
ttgttgctaaaacggttggccatggtttcaccaatgtcaatccttgcttgtcttggcaat
gaagctgagtcaattagagatatgtttctgacaagactacaagcagtttctgaggacatt
caactgaaagttagcatcctagagttcctgtctgtatgtgttgacacacaacctggtctt
ctagaactgtttctaaatgttcagcagcccgaagacaaagctacagagaaaaccaaaccc
gatttgaaagttggacgtaacagctgcctgcccatactgctggacttgatggaggtcaaa
aaacagtgtacttatgaatgtccacctgaactgctgtgtgcctgtctggaccttgttcac
tctctgtggcatggaatgagagaaacacccatgactgttctcagagataaagatagtttc
tggcccagtgtgttagcacccttgttgaaggacctcccagttgcagacaaacaggctatt
aaagattgcattcttacagcggccaaggaaaccaaagcattggaagcacatcatgaccag
acagtggcagacctcccagctcttaatttgctcttagcatggaagagtttcttgactaca
ttaacatgttgtaaggtcacagacattaagctgtctgacaagataaaatatacaattctt
cttgacctgcttcatggcatcaatgctcagtttgaatcaggtgatccaacgcctgtgaag
atgaaacttgcttctatagccagcgggctgtattttacattaatcaaatcatggggaaaa
gatatcagccaatgtgaaggttctcaggccaacaagtctgcttcagaggatgtggtcagt
agtttgactagtgccatttcaggcatcagagaatctactggagtggacatgatcttacca
tctgtacacattggtcttctgggtgcggtcacctctatacttcagcaatgtggacctaaa
attatacctcaacaatgtggacctaaaatagacaatctgccaacattaatcagtgatcta
cttcctgtcgtgtgcactgtgtttctacagagttcatggctccttccttcccttgttgaa
agtaatgcagccagctcagctaacaatagctctgagataacaactagatccaaacaacca
gaatcctttaatgctcacataaaacttcaaattgtttgctgttgtctgatagtggaactg
cttcagcagagttcaaatcttagcagctcattggctgtcatccaagagcatggtattgtg
tcttctcttctgactacagctgaagctctcatgaaagccaagcaaggcatctctttcatt
tatactgctttcctgctattgatagagatcgccaacacagaaatgggtgccaatatgttg
ctgaatagcaacgtgacctcacacttatgtttagttttgaccacatgttactccagtgag
gatgcttttcaacccaggaacattttgtctaaagcgttcaccagctcacgttcattaact
gtcacctggcactcattgtattgccttagtcttgacttattttctgtcatgctctatgta
ttgggtttttcttttttggaggacgccctcaatatagttggagttcaccaggccaggatg
cagcagtctttgctatctgtaagtatgaacatgagtaagtctgtactacaagaggcacaa
gctacactgaactttataaaacaattgtgtgtctatcagaagcagtggaggtttcactta
cccaatgtcatggctaagttaatgggtgcattgatggatttagtacattcctatgtggct
ttgatgatcagacccaggtatctacagctcctactagatcatcacaaagtacaggacagt
gctggcaaagcagagtcattgctgcaggcaccaacctatctccagcaccaaagttcattg
gatgatgtagaacaaccaactggtaaactggtggatgcacagaacagtatgctgaaactg
gttggccagtgtcttttctgtttgaaatatttcacacctagtttgccagaagttctttgt
gaccagggtattgatgtgtctgactgggaaccaatactaagtcttggctttggaacgccc
tctttagatggagacagaaatggactgacctttggcactttgataaactgtgttaatgtg
tgtgttcgacatctggttaagaatgacactaagttatcaccacatagaagctcacctgag
gatgccaactcatctcaagtatccaaaaatgtggttcatctggtgttagaactgtccctg
gatctactcatgtctcaagcatgcaggtatctgcgggatccagaactggcagctagagat
tgtcagtttctaaaacgagagttgggcacagaattgaattcctgtttgtctccactacat
cgtcagttacgtcggggtgctgacagatccttgtcactgacacctccccagcaccagtca
ggtttgtctccttag
DBGET
integrated database retrieval system
