Biomphalaria glabrata (bloodfluke planorb): 106066121
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Entry
106066121 CDS
T07368
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03020
RNA polymerase
bgt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106066121
09124 Replication and repair
03420 Nucleotide excision repair
106066121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgt03021
]
106066121
03400 DNA repair and recombination proteins [BR:
bgt03400
]
106066121
Enzymes [BR:
bgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106066121
Transcription machinery [BR:
bgt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106066121
DNA repair and recombination proteins [BR:
bgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106066121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
106066121
NCBI-ProteinID:
XP_013080539
UniProt:
A0A2C9JSD3
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MYGQDEDMYDQDDESDEITMDLWQEACWIVINSYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDAPPIDLQAEAQHTSGTIETPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLT
YSAPLYVDITKTVIKEGEDPVETTHQKTYIGKIPIMLRSTYCLLSGLADRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFQQKDSKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGGQGSKKSAIGQRIISILPYIKQEIPIIIVFRALGFVADRDILEHIIYDFDDPELME
MVKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSEFCET
KKAYFLGYMVHRLLLAALGRREVDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRMYA
QKFIDRGKEFNMELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRLNSPIGRDGKLARPRQLHNTHWGMICPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIQEATKIFVNGCWVGIHRDPEHLMTTLRKLRREMDVIVS
EVSMIRDFADREIRIYTDAGRICRPLLIVENQKMLLKQSHIKQLKQREFNNYSWQDLVAS
GVVEYIDPLEEETVMLAMTPADFMQEGKDVSYCSTYTHCEIHPAMILGVCASIIPFPDHN
QSPRNTYQSAMGKQAMGVYITNYHVRMDTLAHGLFYPQKPLVATRSMEYLRFRELPAGIN
SVVAIASYTGYNQEDSVILNASAIERGYFRSFFFRSYKDAESKKGLDQEEVFEKPNRETC
QGMRIAIYDKLDDDGIIAPGTRVSGDDVLIGKTLTLPANDDELDSTARRFSKRDASVFMR
RSETGIVDQVMVTINNEGYKFCKIRVRTVKTPQIGDKFASRHGQKGTCGITYRQEDMPFT
CEGITPDIIINPHAIPSRMTIGHLIECLQGKVAANKGEIGDATPFNDTVNVQKISKLLQK
YNYNLRGNEVLYNGFTGRKLNAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEG
RSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYRVHVCNLCGIIAIANLRNQTFEC
RSCKNKTQISQIRIPYACKLLFQELMAMSIVPRMMVTA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtatggccaagacgaagatatgtatgaccaagatgatgaaagtgatgaaattaccatg
gacctgtggcaagaagcctgctggattgtcattaattcatactttgatgaaaaaggtctt
gttagacaacagcttgattcatttgatgaattcattcaaatgtctgttcaaagaatagtg
gaagatgctcctcctattgatcttcaagcagaggctcagcacacatctggtactattgaa
acaccacctcgctatctgctgaagtttgaacagatttatttatctaagccaacacattgg
gaaaaggatggtgcccctagtcctatgatgccaaatgaagcaagattgagaaatcttact
tattctgcaccactatacgtggacattacaaaaacagttatcaaagaaggagaagatcca
gtggagactactcatcaaaagacctacattggtaaaataccaatcatgttacgctctact
tattgtcttctgagtggtctagctgatcgtgatttgacagagttaaatgaatgtccatta
gatcctggtggatactttattatcaatgggtcagaaaaagtgctgattgctcaagaaaag
atggcaactaatacagtatatgtctttcaacaaaaagactccaagtatgcctttaaaact
gagatacgttcatgtcttgagcattcctctcgtccgacaagtacactttgggttaacatg
atggccagaggagggcagggctctaaaaaaagtgccattggtcaaagaataatctctatt
ttgccttacatcaagcaagaaattcctatcatcatagttttcagagctcttggatttgta
gctgatcgtgacattttggagcacatcatttatgattttgatgatcctgagttgatggaa
atggtgaagccctctttggatgaagcttttgttatacaagaacaaaatgttgcacttaat
tttattggttctagaggtgcaagaccaggtgttacaaaagaaaaaagaatcaaatatgcc
agagaaatcttacagaaggaaatgttacctcatgttggtgttagtgagttttgtgaaacc
aagaaagcatatttccttggttatatggttcataggctgctgttggctgcacttggtaga
agagaagtggatgacagggatcattatggaaataaacgacttgacttggctggaccactc
ttagcctttttatttagaggactgtttcgaaatttaatgaaagaagttcgcatgtatgct
caaaagtttattgatcgtggtaaagagttcaacatggaattggcaataaaaaccagaatt
attactgatggtcttaaatattccttagctactggaaactggggtgatcaaaagaaggct
catcaagctagagcaggtgtatctcaggtgttgaatagacttacctttgcttcaacctta
tctcatttgcgccggctcaattcacctattggtagagatggcaagctagcaagacctagg
cagttacataacacacattggggaatgatatgtcctgctgagacaccagagggtgcagct
gttggtcttgtgaaaaacttggctctgatggcatacatctctgtaggctctcagccatct
cctatcttagagtttttggaagagtggagtatggaaaatttagaagaaattgcaccttca
gccattcaagaagctaccaagatctttgtcaatggctgttgggttggtattcatagagat
cctgagcatttgatgacaacattaagaaaacttagacgagaaatggatgttattgtctca
gaggtttctatgatccgtgattttgctgacagagaaattaggatatatactgatgctggt
agaatctgtcggcccttgcttattgtagaaaatcagaaaatgcttttgaaacagtctcac
attaagcagttaaaacaaagagaatttaacaattacagttggcaagatctggttgccagt
ggtgtggtggagtacattgacccactagaagaagaaactgtaatgctggcaatgacccct
gctgacttcatgcaagaaggaaaagatgtctcttactgttctacatatacacattgtgag
attcacccagccatgattcttggtgtttgtgcttctatcatacctttccctgatcataac
cagtcaccccgtaatacataccaatctgctatgggtaaacaagctatgggtgtttacatt
acaaattaccatgttcgaatggataccctggcccatggattgttttatcctcagaaacct
ttagtggcaactcgatccatggaatacttgcgcttcagagaactaccagcaggtataaat
tctgttgtggccattgcttcatacactggatacaatcaagaagattctgtcattctcaat
gcatcagccattgaaagaggctactttagatcattcttcttccgatcgtacaaggatgct
gagtctaaaaaaggtcttgatcaggaagaagtatttgaaaaaccaaacagagaaacctgt
caaggcatgagaatagctatttatgacaagttggatgatgatggtatcatagcaccaggt
actcgtgtctcaggtgatgatgttcttattggtaaaaccttgacattaccggctaatgat
gatgagttggatagtacagctcgtcgtttcagcaaaagagatgcaagtgtgttcatgaga
cgcagtgagactggcattgttgaccaggtgatggttactattaataatgaaggatataag
ttttgtaagattcgtgtccgtactgtcaaaactccccaaattggtgataagtttgccagt
cgtcacggtcagaaaggaacttgtggaattacttatagacaagaggacatgccatttaca
tgtgaaggaatcacacctgacatcattatcaatcctcatgctattccatctcgaatgacc
attggtcacttgattgagtgtttgcaagggaaagtagctgccaataaaggagagataggt
gatgctactcctttcaatgatactgtcaatgtacagaaaatttcaaaactgttacaaaaa
tacaactacaatctgagaggcaatgaggttttatataatggatttactggacgtaaactg
aatgcccaggtatttttgggacctacatattaccagcgtttgaaacacatggtggatgac
aaaattcattccagagcaagaggtccagttcaaattctgaacaggcagcctatggaagga
agatctcgtgatggtggcctcagatttggtgaaatggagcgtgactgtcagattgcacat
ggtgctgcacagtttttacgtgagagactatttgaagcctcagatccatatcgagttcat
gtgtgcaatctctgtggcatcattgccattgcaaaccttcgcaaccaaacctttgagtgt
aggtcatgcaagaataaaactcagatttctcaaattcgcataccctatgcctgcaaactt
ttgttccaagaactgatggctatgagtattgtgccacgcatgatggtgacagcttaa
DBGET
integrated database retrieval system
