Biomphalaria glabrata (bloodfluke planorb): 106067654
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Entry
106067654 CDS
T07368
Name
(RefSeq) LOW QUALITY PROTEIN: small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgt03009
]
106067654
Ribosome biogenesis [BR:
bgt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106067654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
NYD-SP28
TPR_IMB1
BP28CT
HEAT_EF3_GNC1
GNC1_N
Motif
Other DBs
NCBI-GeneID:
106067654
NCBI-ProteinID:
XP_013082321
UniProt:
A0A2C9JTH6
LinkDB
All DBs
Position
Unknown
AA seq
2674 aa
AA seq
DB search
MGKSSRHKKQNVHHFVPFSERISSVNIDVIHQIRRVDTETEGTLFGESLDKWTELDLTEH
FLTFRREIVNQVQTYEQLVYHKDEIIQALKLHLQVPNSLALITLFDLVVQLAKDLQEDFV
PYFYSFFEILVNLLTSHTQDVEVLEHIFQTLAYLFRVLWRFLIKDFKEVFSHFSKLLVLK
QKDYIKVFAAESCAYLLRKVKKLNELLNFLFCSLKENPQLAEGIGLLLFEMVKGVKHNFH
TISEKIIPLILSQLGPWNNINKQNKISRELIEKSVTIFFKECAEHTTREHSKDVWKILLE
TVIEVHNACMETCLPDDFKVSSSLSKHLCRLLRLVSVWLEHKCGSIINDPEYVAKTISII
LQSSYSKVLGKDVLATVVNLLLSCKERLSVEAISRIVSLVFKTPFFFGDVQQCIRSLLDV
PFFEKDILSGCLYKVSSEMVGVDEVKKSELLTFLAEIVIHKTQLVVTGEDISYLQLYPLD
LKWTKGSNDFPLAMYIEDIIEQCLKQQFECSPVQISALWAAVLCLPHLSCNARLQDKVIA
LWKKLVNNLQISPTFQNDFIIVLNQLLKGFIINLQSDKSVNLPVSYDEVFKILRCCPAVP
CAVQIADLYLSWPTNSNILNEDTFAKIYKLLEPNLVSPSHQLRLITCHILSLCPVEFPVI
DDDLTRLCLFKTMFIAENLPSPSVQNYREKLIHLRKLEFDVAVKCLPKGIFQKAPLLFLL
GNEFWNFRLLWEPLADLITTHAHGLEVKEFWDVMLHQLKRAAEESEKELTINISYLTNEC
QVPIVDLFKKYKKELLADDRKPDFTNYRVQLWHAMKKFPEKCVLRSDELCELYLQFLKKE
FSYYDEDARVYQNIVAITNESTKEVSSVQVAEGTFELDCTHVDNEKQDAEPETHRVKRRK
AAIQSLLVHLDLFATFKKQRSLFNKSDVQETFLNLLKHKHSVVQKAAFECVITYKSPHII
RYRENFYHLLDDKTFKSEIVLFRVDEESSEVKEEDRDGFLPVLMRILYGKMHGKTGNETG
GKGRGNIRRSIVFGFLCGCKPVELKYFLELLFQPCMHFVTDNPVLMVKEVMNNLDLTKMI
PLKKIKGILHTVSTVTLKIGHRIKDFAHSLLHILLGIAATLTAALKQRQLIIPSVVNMLK
NMRPIVLARLIQFLENFKDFDLTLDEIEAMFQAVVWPQYEKLIFEGVHHPTPLLKLFLFW
SKYNRFIPLLAKSNELSSITPLHSILGLLNAPTLNPTVAAAILELINNLLLSEEEREQEL
SPLPAPYMYIQDTDKNTFCENLLLPHVPSLLCYLQQSLEKMTSCLVVKKQGALIELKILA
RISTFVKSPKECAILCSLLVSFLCKSSHIQQVVEENILVSLTNMMQYVSMLDSFYRSVSQ
LFSSVKRRESRVLLCKLFHVICNSDDYFKSISSLIDQLNAWDKRKVEEPDFILRLQAFNQ
LNTKIADEEPNADLLLPVIHNCCHFIDAIDDLSIRDNSTHCLVKIIAKLAFTNSSEVQKV
FNIVVEKTLVPQVKQGIRSKSEAVRHEFLTVLQSLVKHCPDHVMFTGLKDLCDKDPEADF
FENIRHIQIHKRSRALRRLFKHLKDHSFRPEIHMSYFIPLVYAFVLDSSYSKHANIQDAA
IDLLGAICKQLPWQYYLQLLRFYLKLLPHKVDLQKQLIRIIVTLLDAFHFDLSYSKYVLK
MTPKFVDKTFIDEKDATESPEEVLVENPANTEIENDSLPMEVDLKDVGILKNEILEVKSD
GNILCSTQAATRIHKTIVISLLPQLHKIITQKAKRDDEHKLVKSKYPEDEEILRVPIALA
MIKLLQNLPKGTLENRLPGIILKICNFLRCRSRDVRTTARETLEKAVLSLGSHYFPFIIK
EMKSILTRGYQLHILSFTTHYLLKSLVNTVIPGDLDPSLNILQDIFYSEIFGQVAEEKEV
AAIKAKYFEARFIKGYDAYELLAKCISAGCIDQLVHPIKMILETTHSQHTANKVEILLRK
VADGLMANKSIPLQTMMVFIHSLTATLVNETKPEILPKEDENNENNSKARRPDSCLLLSH
PLLRGGMKPKTSKRTNIHILVEFGLQTTASAMRCFSWLLNFPLPSLRSNIQQVAQGMFAV
LQSYAGAATAKGGNQELISVCFKAVTCLVRDVDYYQVTKDQLQVLLTYCEEDLYNYSRQS
TAFNLIKAILSRKLDIPQLHEVMRKVFEMSITASAANVRLQARQVILHYLMNYPHGKMMT
KHIYFFLDHLNYDLEEGRESALEMIMSMFSAFPIKTLHNHWPKFFSALSITSYNDSSLKC
RKLAMVVLKYLIGKVELKCRKAMFIEVIKWIKTKNLCVRSMGYQVCGMFVEVEGGKFEFH
LDEVVPLLQLHMDPSQYKENEDDKSQETAKKDICLLAVLNTTMKIFRELGIIRNAKYTKE
INLIWGYVLSHLSYTHMQVRLAANQLLGIMFSAWEPREISLQQLYNKEDNLEPQIPYILE
DTPDKVRNLGIALCNQLKTSNFDDTFGTQVIKNLLYVTRLTEVLNLPQDLIWLAKKVTRE
ANIEVINNIKVTLKRNHIFKWIAAVAVTLKQEYVQYLLPVVLPVLLREMTEQSKEQELKS
LALEVCDLLKKATEVEQFTAAYALSLKHRMEKKENRKRQIAAEAVTFPDVAARKKIRHNL
KKKESKKRKIVEKRPLQRVKKSKLSILNMQVDSD
NT seq
8025 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtcctcacgccacaaaaagcaaaatgttcatcattttgttccattttctgag
agaatatcaagtgtaaacatcgatgtcatccatcaaatacgaagggttgatactgagact
gaaggaactctttttggtgaatctttagacaagtggacagagttagatttaactgagcat
tttttgacgtttagaagggaaatagtcaatcaagttcaaacttatgaacagctagtatat
cataaggatgaaatcattcaagcactgaagttacatttacaagtgccaaactctttggct
ttaattactttgtttgatttagtagttcagttagcaaaggatctacaagaagactttgtg
ccttacttctactctttctttgagatacttgtaaatcttttgacatcacacactcaggat
gttgaggttctggaacacatttttcaaacccttgcctacctttttagagtcctgtggaga
ttccttattaaggattttaaggaagtgttcagtcatttttcaaaattacttgtattgaaa
caaaaagattatatcaaagtgtttgctgcagagagctgtgcttatttgcttagaaaggtg
aaaaaactaaatgaactactcaactttttattttgttctttaaaagagaacccacagctt
gctgaaggcattggtttattgctgtttgaaatggtcaaaggtgtcaagcataattttcat
accattagtgaaaagataattccattaattctgtcgcaacttggaccatggaataatata
aataaacaaaacaaaatttcaagagaacttatagaaaaatctgtgacaatattcttcaaa
gaatgtgctgagcacacaactagagaacactccaaagatgtatggaagatattactggaa
acagtgatagaagtgcataatgcctgcatggaaacatgtttgccagatgattttaaagta
tcttcctccttgtcaaagcatttgtgtagattactgcgtctagtttctgtctggctagag
cacaaatgtggaagcattataaatgaccctgaatatgttgcaaagaccattagtataatt
ttgcaatcaagttatagcaaagtattaggcaaagatgttctggctacagtagtcaactta
ttactatcctgtaaagagaggctatctgtggaggctatttctagaatagtttcccttgtc
tttaaaactccatttttttttggtgatgtacaacagtgtattaggtctcttcttgatgta
cccttttttgaaaaggatattctttctggctgcttgtataaagttagcagcgaaatggtc
ggtgtggatgaagttaagaaaagtgaacttctgaccttcttggctgaaatagtaattcac
aagacacagcttgttgtaacaggtgaagatatcagctatcttcagttgtatccacttgat
cttaaatggacaaaaggtagtaatgattttccactggccatgtacatagaggatattatc
gagcagtgtctaaaacaacaatttgagtgttctcctgtccagatatcagcattgtgggct
gctgttctatgtttgcctcacttaagttgcaacgccagacttcaagataaagttattgca
ttgtggaagaaattagtgaataatcttcaaatttctcccacatttcaaaatgattttatt
atagttttgaaccaattacttaaaggtttcattatcaatctacaatctgacaagtcagtt
aatctacctgtttcatatgatgaagtattcaaaattctcagatgttgtccagctgttcca
tgtgctgtccagattgcagatctgtatttatcttggccgaccaattcaaatattttaaat
gaagacacatttgctaaaatttacaaactattagagcctaacctagtctctccttctcat
cagcttcgtttaataacttgccatattctgtccttatgtcctgttgaatttcctgtaatt
gatgatgatttaacaagactatgtctgttcaagacaatgtttattgcagagaatcttcca
tcaccctcagtgcaaaattatagggaaaagcttattcatctgcgtaaattagaatttgat
gttgctgtgaaatgcttaccaaaaggaatatttcaaaaagcacctctcctttttctgtta
ggaaatgagttttggaatttcagactgctctgggagccattagctgatcttataaccact
catgctcatggtcttgaggttaaagaattctgggatgttatgctgcatcagttaaagagg
gctgcagaagaatcagaaaaggaattaactatcaatatttcttatttgacaaatgaatgt
caagttcctattgtggaccttttcaagaaatataagaaagagttactggcagatgacaga
aagcctgattttacaaactatagagttcagttatggcatgcaatgaaaaagtttccagaa
aaatgtgttcttagatctgatgagctatgtgaactctatcttcagtttctaaaaaaagaa
tttagctattatgatgaagatgctcgagtttatcaaaatattgtggccattacaaatgag
tcaactaaagaagtgtccagtgtacaagttgctgaaggcacttttgaacttgactgcaca
catgtagataatgaaaaacaggatgcagaaccagaaactcatagagttaaaagaagaaaa
gctgccattcagagtcttttggttcatctggatttgtttgctacattcaaaaaacaaaga
tccttatttaacaagtcagatgttcaggaaacatttttaaatctgttaaaacataagcat
tcagtagttcagaaagcagcatttgaatgtgttatcacctacaaatcaccacatattata
cgttatagagaaaatttctaccatcttcttgatgataagacttttaaaagtgagatagtt
ctgttcagagttgatgaggaaagcagtgaagtaaaagaagaggacagagatggttttctt
ccagtactcatgagaattctatatggaaaaatgcatggcaaaactggaaatgaaactggt
ggtaaaggtcgaggtaacatacgccgttcaatagtctttggatttctttgtggatgcaaa
ccagtggagttaaaatatttcttggaattgttgttccagccttgcatgcactttgtcaca
gacaatcctgttctgatggttaaagaagtcatgaacaatcttgatttgacaaaaatgatt
cctttaaagaaaataaaaggtattctgcatacagtaagcacagtaacactgaagataggt
cacagaattaaggactttgctcattctttgcttcacattctgttgggtatagcggctaca
ctaacagctgcattaaaacaaagacaactaataatacccagtgtggtgaacatgttgaag
aatatgagacccattgtcttagcaagacttattcagtttttggagaacttcaaagatttt
gacctaactttagatgaaatagaagcaatgtttcaagcagttgtctggcctcagtatgaa
aagctaatatttgaaggagttcatcacccaacaccattgttgaagctcttcctcttttgg
agcaaatataacaggtttatcccacttcttgccaagtcaaatgagctttcctcaattaca
ccattgcattcaatacttggcttacttaatgcaccaacactaaatcccactgtagctgct
gccattttagaattgatcaataatttgttgctgagtgaagaagagagagaacaggaactt
tcccccttgccagctccatacatgtatatacaagatacagataagaatacattttgtgaa
aatcttctcttgcctcatgttccaagtttactttgttacctacaacagtctttagagaaa
atgacttcatgtttggtggtcaaaaagcaaggtgcccttatagaactaaaaattttagcc
aggatcagcacatttgtgaaatctcctaaagaatgtgccattttatgcagcttgctggtg
tcctttctgtgtaaaagctcacatatacaacaggttgttgaagagaatattttggtttct
ttaaccaatatgatgcagtatgtgagcatgttagattctttttacaggtcagtaagccag
ttgttctcaagtgtaaagagacgagaatctagagttttgctttgtaaactgtttcatgtt
atttgtaacagtgatgactacttcaaaagtatttcatctcttatcgaccagttgaatgct
tgggacaaaagaaaagttgaagaacctgattttatcctgagactacaagcatttaatcaa
ctgaatacaaaaatagctgatgaggaacctaatgctgatcttttgttacctgttatacac
aattgctgccattttattgatgctattgatgatttgtctataagagataactctacacat
tgtttagtgaaaataatagctaaactggcttttacaaactcatctgaagtacagaaagtc
tttaatattgttgtggagaaaactttagtcccgcaagtaaagcagggcataagaagtaaa
tcagaggctgtccgtcatgagtttctaacagttttacagagtttggtcaagcattgccca
gatcatgtgatgtttactggactaaaagatttatgtgataaggatcctgaggctgacttt
tttgagaacattcgacatatacagatccataaaagatcaagagcattaagacgtttattc
aaacacttgaaggaccacagctttcgtccagagatacacatgtcttatttcattcctctg
gtgtatgcatttgttttggacagcagctactcaaagcatgccaatattcaggatgcagct
attgatcttttgggagccatttgtaaacagttaccatggcaatactatttgcagctgcta
agattctacctcaaattgttgcctcacaaagttgatttacagaaacagttgatcagaatt
attgtaacattgcttgatgcctttcattttgacttgagttattctaaatatgttttgaag
atgacaccgaagtttgtggacaaaacatttattgatgaaaaggacgcaactgagtcccca
gaagaagtcttagttgagaatcctgctaatactgaaattgaaaatgactctcttccaatg
gaagttgatttgaaagatgtgggcatactgaaaaacgagatcttagaggtgaagagtgat
gggaacatcctctgttcaacccaggctgccacaagaatccataaaactattgtaatatct
ttattacctcagctacataagattattacacaaaaggctaaaagagatgatgaacacaaa
ctggtcaaatcaaaatatcctgaagatgaagaaatcttgcgtgttcctattgcactagct
atgatcaaacttttacaaaatttaccaaaaggaactttagaaaatagactaccaggtatc
attttgaaaatttgtaactttctccgatgtcggtcacgagatgtgcgaactacagctaga
gaaactttagaaaaagctgtcttgtccttgggatctcattacttcccatttataatcaaa
gaaatgaaaagtatacttacaagaggatatcagctacacattcttagtttcacaactcac
tacttactcaagagtcttgtaaacacagtgatccctggtgaccttgacccttctttaaat
atcctgcaagacatattctactcagaaatatttggccaggtagctgaggagaaagaagta
gctgccataaaggccaagtattttgaggctagatttatcaagggatatgatgcttatgaa
cttttggccaaatgtatttctgcaggatgtatagatcaattggtacatccaataaaaatg
attttggaaactacacacagtcagcatactgcaaataaggtagagattttactgaggaaa
gtagctgatggcctgatggctaataaaagcattcccttgcagactatgatggtatttatt
cactctctcactgcaacgctggttaatgaaacaaagccagaaatattaccaaaagaagat
gaaaacaatgagaacaactcaaaagcgagaagaccagatagttgtcttctcctttctcat
cctttactacgtggaggtatgaagccaaaaacaagcaaaaggacaaacattcatattctg
gttgaatttggtttacagaccacagccagtgccatgaggtgtttttcttggctcttgaat
tttccactcccatcattgagatccaacatacaacaggtggcacaggggatgtttgcagta
cttcagagttatgctggtgctgctactgctaagggaggcaatcaagaactgataagtgtg
tgctttaaggctgtgacatgtttggtacgagatgtagactactatcaggtgactaaagac
caacttcaggtgctacttacctattgtgaagaagacttgtataattattctaggcaaagc
acagcatttaatttaatcaaagccattttatccaggaagttggacattcctcaacttcat
gaagtcatgagaaaagtatttgaaatgtccatcacagccagtgctgccaatgtcagacta
caggctagacaggttattctgcattatttaatgaattacccacatgggaaaatgatgacc
aagcacatttactttttccttgaccacttaaactatgatctggaagaaggaagagagtca
gcactagagatgatcatgtccatgttttcagctttccccataaaaaccttacacaaccac
tggcctaagttcttttctgcactttccattacttcttacaatgacagctctttgaaatgc
agaaaacttgccatggtggtcctcaaatatttaattgggaaggtggaattgaaatgtaga
aaggcaatgttcattgaagttatcaaatggatcaaaaccaaaaatttgtgtgtcagatct
atgggttaccaagtgtgtggaatgtttgttgaagttgaaggaggcaaatttgaatttcac
ttggatgaagtagtgccattacttcagcttcatatggaccctagtcaatacaaagaaaat
gaagatgacaagagtcaggaaacagcaaaaaaagatatctgtctactggctgtactgaac
acaacaatgaaaatatttagagaacttggtattattagaaatgccaaatatacaaaagaa
attaacctgatttggggttatgttctctcacacttgtcatacactcacatgcaagtcagg
ctcgcagccaatcagcttcttggcatcatgtttagtgcatgggaaccaagagaaatttct
ttgcaacagttatacaataaagaagacaatttggagcctcaaattccttacatcttggaa
gacacacctgataaagttcgaaacttaggcattgctttatgtaaccagttgaaaacatca
aatttcgatgatacatttggaactcaggtaataaaaaatttgttgtatgttactcgactc
acagaagttttgaacctaccacaagaccttatttggttggctaaaaaagttaccagagaa
gccaatatagaagttattaataatatcaaggttacacttaagagaaaccatatatttaag
tggatagctgctgttgctgtgacactcaagcaggagtatgtacagtatttattacctgta
gtactgccagttttactaagagaaatgactgaacagtctaaagagcaagaactgaaaagt
ttagcccttgaagtctgtgatcttttgaagaaagctacagaagttgagcagtttactgca
gcttatgctctttctttgaagcacaggatggaaaaaaaagaaaatcgaaaaagacaaata
gctgcggaggctgtgacctttccagatgtagctgccaggaaaaagattagacataatctg
aaaaagaaagaatcaaaaaagcggaagattgttgagaagaggccacttcagagagtgaaa
aagagtaagctgtccattctcaacatgcaagtggacagtgactaa
DBGET
integrated database retrieval system
