Biomphalaria glabrata (bloodfluke planorb): 106067683
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Entry
106067683 CDS
T07368
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03013
Nucleocytoplasmic transport
bgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106067683
09122 Translation
03013 Nucleocytoplasmic transport
106067683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106067683
03041 Spliceosome [BR:
bgt03041
]
106067683
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106067683
Spliceosome [BR:
bgt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106067683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Cytochrom_CIII
Motif
Other DBs
NCBI-GeneID:
106067683
NCBI-ProteinID:
XP_013082361
UniProt:
A0A9U8ECY3
A0A2C9LG16
LinkDB
All DBs
AA seq
703 aa
AA seq
DB search
MSKEVKDGKKRLLKADTPVPGLTDPKKLRQEIISKNQEGWTIASEEDDALLRDPLTDLQS
FQASCNFLKSAIRDIKNVKSSRPDAVGEINSIRTDATIHFIHMKKLNRLAHFRCRKVRET
TNEAKHKIDQCHLQLQNLLYEAMHLEKEITKCMEFKSKDEEIELVSVEEFYQDAPATITN
ESVTKNDPHLQMLGRLEWELELRKNLASKLTATKKNKEQLSQEIQSKQDYLETLQPKLSA
ILQATRPVQDYLSMPYNAIQEEHQMAQHLPQPLYVLYMQTSAFKDACDKCLKVSITGDVD
AAKSLATWNFEPDEESDSDQEDLEKQETKRHRRVSAEQSQEKKNKIFRKHPLSVNLTITN
EDGTELELTFCYLLELNIITVTVKVNLSEKGTLSSITGGDLLSPDLILDELYPGDFGNDS
PNPANHYELKKHGLLDLSTYIPLVGRPYLWCQLMGGLQFLKKEISLAEDADGFSNIARIP
VQAKHSICAANIQKTISLLRQRISSRLSLLQQLSSLERGIIPVSVDFVKQFPAKINAHLS
TWSRCTWEDLQTLAHAKRFLKSGLIRSSSIIFQAVIDRGSAKMNAHVVLTADYPQVPPLF
ILDIVWQTQRTALTDIFVMEMEEEVNLHYQELSSSTQQNQLLPNQLQRLLMCFDVYLETD
TPASTLVPVEIPKEKIMPRTSRGPARSKPFKYLPELGIFTQRY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaagtaaaagatggaaaaaagcgtctgctcaaagcagatacgcctgtacca
ggattaacagaccccaaaaagctaaggcaagaaattatttcaaagaatcaagaaggctgg
actatagcatcagaggaagatgatgctttacttagagatcctttgacagatttgcaatct
tttcaggcttcttgtaactttctcaaatctgctataagagacattaagaatgtcaagtca
agtagaccagatgctgtcggtgaaatcaattcaattagaactgatgcaacaatacacttc
atccacatgaaaaagctaaaccggcttgctcattttcgatgtcgtaaagtcagggaaaca
acaaatgaagccaaacataagattgaccagtgtcacctacagctacagaacttgctctat
gaagccatgcatttagaaaaagaaataacaaagtgtatggagttcaagtctaaagatgaa
gagattgaacttgtttctgtggaggagttttatcaagatgcaccagctactataaccaat
gagtctgtcaccaaaaatgatccacatctacaaatgcttggcagactggaatgggagttg
gagttaaggaaaaacttagcttccaagctgacagctaccaagaaaaataaggaacagctg
agtcaagagatccagtccaaacaagactacttggagacactccagcctaaactatctgcc
atacttcaggccacaagacctgttcaagactatctttccatgccttacaatgccatccag
gaggagcatcagatggcccagcaccttccccagcctctctatgtcctctacatgcagaca
tcagccttcaaagatgcttgtgacaagtgtttaaaagtttctatcactggggatgtggat
gctgcaaagtcattggccacatggaactttgagccagatgaagagtcagacagtgaccag
gaagacttagaaaaacaagagacaaaacgccatagaagggtgtcagcagaacaaagtcaa
gaaaagaaaaacaagatttttagaaagcatcccctctctgttaacctaacaatcaccaat
gaagatggcactgaactcgagcttaccttctgctatctcctggaactgaatatcatcact
gtcactgtcaaagtaaacttaagtgaaaagggaacattaagttccatcactggaggagat
cttctgtcccctgatttgattttggatgaactttatcctggcgattttggcaatgactca
ccaaatccagccaatcactatgaactgaaaaaacatggcttactggatctgtcaacctac
attccacttgttggtagaccctacctttggtgccagttgatgggtggcttgcaatttctc
aaaaaggagatcagccttgcagaggatgccgatggtttttccaacatagcaaggatacca
gtgcaggccaaacacagcatctgtgctgccaatatacaaaagaccatttcattgcttcgt
cagagaatctcatcaaggctatcgcttctccaacaactgtcttctctagaaagaggcata
atccctgttagtgttgactttgtcaaacaattccctgccaaaattaatgctcacttgtcc
acatggagtcgttgcacttgggaagacctccagacactagctcatgctaagagattcttg
aagtctggactgatcagatcatccagtattatattccaagctgttatagacaggggatca
gccaaaatgaatgcccatgttgtgctgactgccgattacccacaagtcccaccactattc
atactggacattgtgtggcagacccagcgaactgccttgacagatatctttgtaatggag
atggaggaggaagtcaatctgcattaccaagagctgtccagcagtacacagcagaatcag
ctcttgcccaaccagctacaaaggctgttgatgtgctttgatgtctacctggagacagac
actccagcatcaacccttgtgccagtggagattccaaaagaaaagatcatgccaagaact
agcagaggacctgctcgttcaaagcccttcaagtatttaccagagttaggaatttttact
cagagatattga
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