Biomphalaria glabrata (bloodfluke planorb): 106069737
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Entry
106069737 CDS
T07368
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106069737
Enzymes [BR:
bgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106069737
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106069737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
HA2_C
AAA_19
OB_NTP_bind
AAA_22
DEAD
nSTAND3
HA2_N
Rad17
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
106069737
NCBI-ProteinID:
XP_013084923
UniProt:
A0A2C9JVF9
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MKHKHHKSKHGHIDKECKHQHKHRTEASDQDSNSDISDSEKEKKIQKKSQSSSERKDLLD
SNPDTETLDYNFDFSKYKASLSRMFFRENFFSKIAIRGSQEHDDFWNFVNKFVEFQRKKA
EKSKDAKVQLGAESGQLNLPKVFDVSYKINISFISKDFDVFFKKNRLVDYQLEKELSRGR
VLQFRSIILHYLDFQQKQKFQKIYKICKDQRELPIYQHKETIIQMLQKYQVIVVAGDTGC
GKSTQVPQYLLEAGYQKIACTQPRRIACISLAKRVGYETLNEYGSEVAYQVRFEKSKTQS
TRILFLTEGLLLRQMKTDPLLEMYNIIIIDEVSSLPDLLINVPGRLYPIELEYCPVKTDD
SVDSKRLDPRPYINIMQRIDHKHPSTERGDLLIFLSGMSEIMAVVEAAKAYAQKTKRWIV
LPLHSALSIEEQDKVFDYAPDGVRKCVVSTNIAETSVTIDGVRFIVDSGKVKEMSFDPKF
KMQKLQEFWISRASSEQRKGRAGRTGPGVCYRLYDESDYNSFDEYSTPELQRVPLDSLIL
QMISMGLPDARKFPFIEPPNMSSVENSIIFLKEQAALALDESLTPIGQMLSMLPVDVVIG
KMLIMGSIFNMIDPILSITAAMSVQSPFTNRAYTDHDALVARKPLESEHGDPFTLLNAFD
EWIQVKAQGQGTRKWCKRRGLEEQRFYEMTKLKRQFKDLLKDHHLLDREEATARYMSSDE
RRAQHGERKKLNELRKEKMKDNKRRKFLTLEDEAQQCLVPWARVLVLYHKIISYNNNTFV
LTYLFLPSNFIFFLCQTKQSKPFVLLHPTSIFASHPDLLTPKYLEHKKLSQSELKGLFSS
KHELLAYVSLLETNNKPYLVNAMKVPALQTVTLFSNSIDTNADCTRLIFDSWLEFKFKDA
LTAEKVISSVIQLRSTWHSLLLVRLKDTFEGLEEDRRISTRARQLERILASKLTEFLNAD
FLYSIRRVLAAEMHRAYVGPGKVTDQGTAAMFDKILKVNSMGKEHPIKGGIQVTDYLTFN
CLGLEQLQVEDSEKISELNPLRKSYFCTECNKELSLTTTEILKHKKTHLAT
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacaagcatcataaatctaaacatggccacatcgacaaagagtgcaagcatcaa
cacaaacatcggacagaggctagtgaccaggacagcaactctgatatcagtgatagtgag
aaggaaaaaaaaatccagaagaaaagccaaagttcatctgaaagaaaagatttactggat
tcaaacccagacactgaaactctcgattacaattttgattttagtaaatacaaagcatca
ttgagcagaatgtttttcagggaaaacttcttttcaaaaatagctattcgtggatcacaa
gagcatgatgacttttggaattttgtgaataaatttgttgaatttcagcgaaaaaaggcg
gagaaatccaaagatgctaaagttcaacttggagctgaatctggtcaactcaacctccca
aaagtatttgatgttagctataaaatcaatatttcctttatcagcaaagattttgatgta
tttttcaagaaaaacaggctagttgactatcaacttgaaaaggagctatcaagaggaagg
gtactgcaatttcgatcaattattttacattatctggactttcaacagaaacaaaaattc
cagaaaatctacaaaatctgtaaagatcaaagggaactccctatctaccagcataaggaa
acaatcatccaaatgttacaaaaatatcaagttatagttgtagcaggtgatacaggttgt
ggcaaatcaactcaggtacctcagtatttattagaggcagggtatcagaagattgcctgt
acacagcctcgaaggattgcttgtatttctttggccaaacgtgttggttatgaaacactg
aatgaatatggtagtgaagtggcatatcaggttcgctttgaaaaaagtaaaactcagtca
acgagaattctgtttttaactgaaggcctgttactgcgacagatgaaaacagatccactt
cttgagatgtataacatcataattattgatgaggtaagctcattgcctgatcttctcata
aatgttcctggtagattgtatcccattgaattagagtactgtccagttaaaacagatgat
tctgttgattcaaaacgtcttgacccaagaccttacatcaatattatgcagaggattgat
cacaaacatccatccacagagaggggggacttacttatctttctgagtggcatgtctgag
attatggctgtggttgaggcagcaaaagcctatgcccagaaaactaagcggtggattgta
ctgcctctgcacagtgctctgtcaatcgaggagcaagataaagtttttgactatgctcct
gatggggttagaaaatgtgttgtatcaaccaacatcgctgaaacatctgttactatcgat
ggggtacggtttattgtggactcaggaaaggttaaagaaatgagttttgacccaaagttt
aagatgcaaaaacttcaagagttttggattagtcgagccagttcagagcagaggaaagga
cgtgcaggacgtactggcccaggcgtatgctacagactgtacgacgagtcagattacaat
tcttttgatgaatactcaacaccagagctgcagcgagttcctttagactctctcatttta
caaatgatctccatgggattacctgatgctagaaaatttccatttattgagccaccaaat
atgtccagtgttgagaactccattatctttcttaaggaacaagctgctcttgcattggat
gagagtttgactcccattggtcagatgctgtcaatgctaccagtggatgtggtcataggg
aaaatgcttatcatgggatccattttcaatatgattgatcctattttatcaatcacagca
gcaatgagtgtccagtctccatttactaatcgagcttatactgatcatgatgctctggtt
gctaggaaaccattagagtcagaacatggagatccattcactctactcaatgcctttgat
gaatggattcaggtcaaagctcaaggtcaagggactcgcaagtggtgtaagagacgtggg
ctagaggaacagagattttatgaaatgactaaactaaagcgccagttcaaagatctgtta
aaggaccatcatcttctagacagagaagaggcaacagcaagatatatgtccagcgatgaa
agacgagctcaacatggggagagaaaaaaattaaatgagttgaggaaagagaaaatgaag
gacaacaaaagaagaaaatttctgacgctcgaagatgaagctcaacaatgtctggtacct
tgggctagagtattggttttatatcacaaaataatatcatacaataataatacatttgtt
cttacatatttatttttgccatctaactttatatttttcttatgtcaaaccaaacagagt
aaaccatttgtccttctacatcctaccagtatatttgctagtcacccagatttattaaca
ccaaaatacctagaacacaaaaaactttcacaaagtgagctcaagggattatttagttcc
aaacatgagttgttggcctatgtatcccttcttgaaaccaacaacaaaccttatctggtc
aatgctatgaaagttccagccttgcaaacagtaactctcttttctaacagtatcgatact
aatgctgattgtaccagattaatctttgacagttggttagagtttaaatttaaagatgcc
ctgacagctgagaaagtaatctctagtgtcatacagctgagatcaacatggcatagtctg
ctgttagtcaggctgaaagatacttttgaaggtttagaagaagatcgtagaatcagtaca
agagccaggcagctggagagaatattggccagcaaattgacagagttcttgaatgctgac
tttctgtactctattcgtagagttctggcagctgaaatgcatagagcttatgttggtcct
ggcaaagtgacagatcaaggaactgctgccatgtttgacaaaatcttgaaagtaaattct
atgggcaaagaacatcctattaaaggtggcatacaagtcacagattatctcacttttaac
tgtctaggtttggaacaacttcaagtggaagattcagagaaaatatcagaattaaatcct
ttgagaaaaagttatttctgtacagaatgtaataaagaactttctttgaccactacagaa
attttaaaacacaagaaaacacatctagcaacgtag
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