Biomphalaria glabrata (bloodfluke planorb): 106070821
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Entry
106070821 CDS
T07368
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106070821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgt03041
]
106070821
Enzymes [BR:
bgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106070821
Spliceosome [BR:
bgt03041
]
Complex C
Other components
Step II factors
106070821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_N
DEAD
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
106070821
NCBI-ProteinID:
XP_013086241
UniProt:
A0A2C9JIP5
LinkDB
All DBs
AA seq
1013 aa
AA seq
DB search
MASLELDDDIHRLEGTSGKETGGLIIMKKGPSKDGDTAHTFKRPDMPKVSLLGLDKLAAS
KREIDSEIHMTPKRSKVSSYKEDDENDVEDDDYKKMSKKTNKDKERYYRHPQEETPSHPG
GVNSEAKHRLQKHSRYKDRGISAYSSSKEKKREKERRRDKDSYSERKSFYDDRSARSYRS
ERASRDWEETPDSRRSYYHDSVQTPSYKIKDTPSRSSWDDDDLPSNSKSSWDMPTPSRDH
SSTKEIKSVRGNNKSVDNRQSSRSERDNKPSRKQSDYTPKATPTYKYNEWMKDKKTIQYT
PKEEMKSGKENVLEFESEEDRQEWENEQKRLDREWYNLDEGYDDEHNPFSGTSQAYTKKK
EEELEQKKKKRMSAQQRQINKDNELWETNRMLRSGVVNRVNFDEDFDDENEARVHLQVLN
IVPPFLDGRIVFTKQPEPVVPLRDPTSDMAVVSRKGCPVVRIHREQKERKKAQKKEWELA
GTNIGNIMGIKKVDDEEDKTLEPNFKEDHKFADVMQEKNEAVSEFALKRSIREQRQYLPI
FAVRNQVSCSFINCKLIIVSLFVILYYIIMFLPQYLHEDGYTKLGMIGCTQPRRVAAMSV
AKRVAEEMNVKLGEEIGYAIRFEDCTSEKTMIKYMTDGILLRESLRESDLDNYSAIIMDE
AHERSLNTDVLFGLLRNVVARRHDLKLIVTSATMDATKFAMFFGNVPVFTIPGRTFPVDI
LYSKNPQEDYVDAAVKQALQVHLGGQPGDMLIFMPGQEDIEVTCELIAERLGELDEAPPL
AILPIYSQLPSDLQAKIFQKAPDGIRKCVVATNIAETSLTVDGIMFVIDSGYCKLKVYNP
KIGMDALQIFPISQANANQRAGRAGRTGPGQAYRLYTHRQYKDELLITTVPEIQRTNLAN
VVLLLKSLGVQDLLQFHFMDPPPEDNILNSMYQLWVLGALDNTGTLTPLGRNMVEFPLDP
ALSKMLIVSVDMGCSADCLVSTFIFSCLCGWGVCMDTVDTFYGMIKICKLSAA
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcatctttagaacttgatgatgatattcatagactggaaggcaccagtgggaaagag
actggggggttaatcataatgaagaaaggaccatcaaaagatggggatacagctcacact
tttaaaaggccagatatgcctaaggtgtcattgttaggcttagacaaattggctgcttca
aaaagagaaatagatagtgagatacatatgacacccaaaaggtcaaaagtatcttcttat
aaagaagatgatgagaatgatgttgaagatgatgattataaaaagatgtccaaaaaaaca
aacaaggataaagaaagatattatcgacatcctcaagaagaaacaccttcacatccaggt
ggtgttaactctgaagctaaacacagacttcagaaacatagtaggtacaaagatcgtggt
atttcagcttactcatctagcaaagaaaagaaaagagagaaagagagaagaagagataaa
gattcctacagtgaaagaaaatctttctatgatgatagatcagctagatcctacagatct
gagagagcatctagagattgggaagaaacacctgattcaagaagatcatattatcatgat
tcagttcaaactcctagttataaaataaaagataccccatcaagatcatcttgggatgac
gatgatttgccaagcaattctaagtcatcatgggatatgcccacaccatcacgagatcat
tctagtacaaaggaaataaagtcagtcaggggtaacaacaaaagtgtagacaataggcaa
agcagtcgatcagaaagagacaacaagccatcaaggaaacaaagtgattacactcctaaa
gccacacccacttataaatataatgaatggatgaaagacaagaaaactattcagtacaca
ccaaaagaagaaatgaagtctggtaaagaaaatgttttagagtttgagtctgaggaagat
cgccaagaatgggaaaatgagcaaaaacgtttggatagagaatggtacaatcttgatgaa
ggttatgatgatgaacacaatccattttctggaacatcgcaagcttacaccaagaagaaa
gaagaagaactagagcaaaagaaaaaaaagcgcatgtcagcacaacagaggcagatcaat
aaagacaatgagctctgggagactaacagaatgttacgaagtggtgttgtcaacagagtc
aactttgatgaagactttgatgatgaaaatgaagccagggttcacctgcaagtcctcaac
atagttcctccatttctagatggtaggattgtatttaccaaacaacctgaacctgtggtt
cctctcagggatcctacctcagacatggcagtagtatccagaaaaggttgtccggtggtc
agaatacacagagaacaaaaagagaggaagaaagcacaaaaaaaagaatgggaattggct
ggcaccaacattggaaacataatgggcattaagaaagtagacgatgaagaggacaaaacc
ttggaacccaacttcaaagaagatcacaaatttgcagatgtgatgcaggagaaaaatgaa
gctgttagtgagtttgctttaaaaagatctataagagagcagaggcaatacttgccaata
tttgctgttagaaaccaggtcagttgttcctttattaattgtaaattaattattgtttct
ttatttgttattctgtactacataatcatgtttttaccacagtatcttcatgaagatggc
tataccaagctaggtatgataggctgtactcagcctagacgtgtggcagcgatgtcagta
gctaaacgtgtagctgaagagatgaatgtcaaacttggtgaagaaattggctatgctatt
agatttgaagattgtacatctgagaaaactatgataaagtatatgacagatggtatatta
ttgagagaatctttgagagaatctgatttagataactacagtgctatcattatggatgaa
gctcatgaaagatcgttgaatacagatgttctgtttggtttactcagaaatgtggtggct
cgcagacatgacttaaagctgattgtcacatctgcaaccatggatgccaccaagtttgcc
atgttttttggcaatgttcctgtgttcacaatccctggacgtactttccctgtggacatc
ttgtactccaaaaatccccaggaagactatgttgatgctgctgttaaacaagctctgcaa
gtacatctcggaggacagccaggagatatgctgatctttatgcctggtcaagaagatatt
gaagttacttgtgaacttattgctgagcgactgggtgagctggatgaagctcctcctctg
gctattctcccaatttattcccagttgcctagtgacttgcaagccaagatatttcaaaaa
gcaccagatggtattcgtaaatgtgttgtggcaactaacattgctgaaacttcattaaca
gttgatggcattatgtttgtgattgactctggatactgtaaactcaaggtctacaaccca
aagattggtatggatgccttgcagattttccctataagtcaggctaatgccaaccagaga
gcaggtcgagctggaagaactggtccagggcaagcctacagactctatactcacagacaa
tacaaggatgaactgctcattactacagtaccagagatacagagaaccaatttggccaat
gttgttttattactgaaatctctgggtgttcaagatctgctccagtttcattttatggat
cctccaccagaggacaacatcttgaactcaatgtatcaactctgggtcttaggagctttg
gataacacaggaacattaacacccttaggacggaacatggtagagtttccattagaccct
gcactttccaagatgcttatcgtgtccgttgatatgggatgtagtgctgattgtttggtg
agtacttttatatttagttgcttgtgtgggtggggtgtgtgtatggatacagtagatact
ttttatggtatgattaaaatctgtaagttgtcagcagcataa
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